Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0715 ATGGGCAACAACTGCGTGGGACCAAACATCGGTGGAAATGGCTTTCTCCAATCCGTCACGGCGGCGGTGTGGAAAACGCGCCCGCCGGAGCCCAGGCTTCCACCGCCAAACAATGGCAAAGGTTCAGATGCACGCGCCGATCCTTCCTTGGCGGTTCAGAACACCCCGCCCGAACAGGTTAAAATAACAACCACGGAAACTAAACCGGTTCAGGCGGAGAAACCGGCTAAGCCAGTGGCTAATGACCAGGAACCGACACCTGGCAGTGGTGATGCAGGGAAAGCTAAGAAACCCACTCATGTGAAAAGAGTTTCAAGCATGGGACTTCAAGTAGATTCTGTGTTGGGTAGAAAAACAGAGAACATGAAGGAGTTTTATAGCTTAGGGAGGAAGCTAGGGCAAGGGCAATTTGGGACAACGTTTCTTTGTGTGCAGAAAGGGAGTAACAAGGAGTTTGCATGCAAATCCATTGCTAAGAGGAAATTGACAACACAAGAGGATGTTGAGGATATTAGGAGAGAGATTAGGATCATGCATCACATGGCTGGTCACCCGAATGTGATACAAATTGTGGGTGCTTTTGAGGATGCTGTTGCAGTGCATCTTGTTATGGAGTTATGTGCTGGGGGTGAGCTTTTTGATAGGATTATACAAAGGGGTCATTACACTGAGAGAAAAGCTGCTGAACTTGCAAGATTGATAGTTAGTGTTGTTGAGGCTTGCCATTCTTTAGGTGTCATGCATAGGGACTTGAAGCCTGAGAATTTTCTCTTCGTTAATCATGAGGAGGAATCAGCCATTAAGACAATAGATTTTGGACTCTCCGTGTTCTTTAGACCAGGTGAAACATTTACTGATGTGGTTGGGAGCCCATATTATGTGGCTCCTGAAGTTTTACGGAAGCAATATGGACCAGAATGTGATGTTTGGAGTGCTGGGGTGATCATTTATATTTTACTTAGTGGAGTTCCCCCATTTTGGGATGAGACGGAACAGGGAATATTTGAGCAAGTTTTGAAAGGAGAACTTGACTTTGTTTCTGAACCTTGGCCTAGCATATCTGAAGGTGCAAAGGATCTTGTTCGAAGAATGCTTGTAAGGGACCCTAAGAAGCGATTGACAGCACATGAAGTTCTTTGCCACCCATGGGTTCAGGTTGGCGGTGTTGCTCCTGACAAACCACTTGATTCTGCTGTCCTGTCTCGTTTGAAGCAATTCTCTGCAATGAATAAGCTCAAAAAAATAGCCATTCGAGTAATTGCTGAAAGTTTGTCTGAGGAGGAAATTGCAGGACTGAAAGAAATGTTCAGAATGATAGACACAGATAATAGTGGACATATTACTCTTGAGGAACTGAAAAATGGTTTGGAAAGAGTTGGTTCTGTTCTTAAGGATTCTGAAATTGATTGGTTAATGCAAGCAGCAGACGTTGATAACAGTGGTACCATAGACTATGGTGAATTTATAGCAGCTATGATCCATCTAAACAAGGTCCAGAAGGAGGATCATCTATATGCAGCATTCTCCTACTTTGACAAAGATGGGAGTGGATACATTACACGGGATGAGCTCCAACAAGCCTGTGAACAGTTTGGCCTAAAAGATAATCAACTAGATGACATAATAAGTGATATTGATAAAGATAATGATGGGCGCATTGATTACAGTGAGTTTGCTGCGATGATGCAAGACACTGGTTTTGGCAAAAAGGGGCTTTCAATAGCATGA 1728 0.4404 MGNNCVGPNIGGNGFLQSVTAAVWKTRPPEPRLPPPNNGKGSDARADPSLAVQNTPPEQVKITTTETKPVQAEKPAKPVANDQEPTPGSGDAGKAKKPTHVKRVSSMGLQVDSVLGRKTENMKEFYSLGRKLGQGQFGTTFLCVQKGSNKEFACKSIAKRKLTTQEDVEDIRREIRIMHHMAGHPNVIQIVGAFEDAVAVHLVMELCAGGELFDRIIQRGHYTERKAAELARLIVSVVEACHSLGVMHRDLKPENFLFVNHEEESAIKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKQYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFVSEPWPSISEGAKDLVRRMLVRDPKKRLTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAESLSEEEIAGLKEMFRMIDTDNSGHITLEELKNGLERVGSVLKDSEIDWLMQAADVDNSGTIDYGEFIAAMIHLNKVQKEDHLYAAFSYFDKDGSGYITRDELQQACEQFGLKDNQLDDIISDIDKDNDGRIDYSEFAAMMQDTGFGKKGLSIA* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0715 575 ProSiteProfiles Protein kinase domain profile. 126 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0715 575 ProSiteProfiles EF-hand calcium-binding domain profile. 463 498 IPR002048 GO:0005509
Apr8g0715 575 MobiDBLite consensus disorder prediction 21 104 - -
Apr8g0715 575 ProSiteProfiles EF-hand calcium-binding domain profile. 535 568 IPR002048 GO:0005509
Apr8g0715 575 ProSitePatterns Protein kinases ATP-binding region signature. 132 159 IPR017441 GO:0005524
Apr8g0715 575 ProSitePatterns EF-hand calcium-binding domain. 546 558 IPR018247 -
Apr8g0715 575 ProSitePatterns EF-hand calcium-binding domain. 512 524 IPR018247 -
Apr8g0715 575 MobiDBLite consensus disorder prediction 48 70 - -
Apr8g0715 575 Gene3D Transferase(Phosphotransferase) domain 1 212 389 - -
Apr8g0715 575 ProSiteProfiles EF-hand calcium-binding domain profile. 499 534 IPR002048 GO:0005509
Apr8g0715 575 ProSitePatterns EF-hand calcium-binding domain. 476 488 IPR018247 -
Apr8g0715 575 SMART efh_1 431 459 IPR002048 GO:0005509
Apr8g0715 575 SMART efh_1 503 531 IPR002048 GO:0005509
Apr8g0715 575 SMART efh_1 537 565 IPR002048 GO:0005509
Apr8g0715 575 SMART efh_1 467 495 IPR002048 GO:0005509
Apr8g0715 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Apr8g0715 575 PANTHER SERINE/THREONINE-PROTEIN KINASE 67 567 - -
Apr8g0715 575 SMART serkin_6 126 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0715 575 CDD STKc_CAMK 125 383 - -
Apr8g0715 575 Gene3D Phosphorylase Kinase; domain 1 128 211 - -
Apr8g0715 575 Pfam Protein kinase domain 126 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0715 575 ProSitePatterns EF-hand calcium-binding domain. 440 452 IPR018247 -
Apr8g0715 575 CDD EFh 432 492 IPR002048 GO:0005509
Apr8g0715 575 SUPERFAMILY EF-hand 424 563 IPR011992 -
Apr8g0715 575 Pfam EF-hand domain pair 502 563 IPR002048 GO:0005509
Apr8g0715 575 Pfam EF-hand domain pair 432 492 IPR002048 GO:0005509
Apr8g0715 575 ProSiteProfiles EF-hand calcium-binding domain profile. 427 462 IPR002048 GO:0005509
Apr8g0715 575 SUPERFAMILY Protein kinase-like (PK-like) 125 385 IPR011009 -
Apr8g0715 575 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 67 567 - -
Apr8g0715 575 Gene3D - 391 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0715 Apr-Chr8 6882276 6887254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0715 1 575 EF-hand Containing Proteins AT2G38910 73.765 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Apr8g0715 Pkinase 1.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0715 K13412 - gmx:100813232 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0715 8 6882276 6887254 Apr8g0715 8 6882276 6887254 ECH