Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0705 ATGCATCACTTGGCAGGGAGTGTTAATGTGATATCCATCAAAGAGGCTTTTGAGGATGGTGTTGCTGTCCATGTTGTGATGGAACTGTGTGTAGGTGGTGAACTTTTTGATAGGATTGTGGAAAGAGGGCATTACACTGAAAGAAAAGCAGCTAAACTTGCAAGGACTATAGTTGGTGTGATTGAGTCTTGCCACTCCCTCGGAGTAATGCATAGGGATCTCAAGCCTGAGAATTTTCTCTTTGTCAGTCAGCAGGAAGACTCTCCTCTTAAGGCAATAGATTTTGGACTCTCTACTTTTTTCAAACCAGGTGAAATTTTCAGTGATGTGGTAGGAAGTCCTTATTATGTTGCACCTGAAGTTCTACGCAAACGTTATGGCCCAGAATCAGATGTGTGGAGTGCTGGTGTTATCATATTCATTCTCTTAAGTGGGGTGCCTCCATTTTGGGGTGAATCGGAACACGAGATATTTGAGGCAATTTTGCATCATGAGCTTGATTTCTCATCAGAACCTTGGCCTAGTATATCTGAAAGTGCAAAAGACTTGGTTAGGAAGATGCTTGTTAGAGATCCTAGTAAACGGATAACAGCTTATGATGTTCTTCGTCACCCCTGGATTCAGGTTGATGGAGCAGCTCCAGACAAGCCTCTTGATTCTGCAGTTTTGAGCCGCCTAAAGCAGTTTTCTGCGATGAACAAACTCAAGAAAATGGCTCTTAGAGTTATTGCAGAGAATCTCTCTGAAGAAGAAATTGCAGGATTGAAAGAAATGTTTAAGATGATAGACACAGACAATAGTGGTCAAATTACTTTTGAAGAACTCAAGGTTGGATTGAAAAATTTTGGTGCTAATCTCAATGAATCCGAAATTTATGACCTTATGAAAGCAGCAGATGTTGATAATAGTGGCACAATTGACTATGGAGAATTCATAGCTGCAACATTGCATTTGAACAAGGTTGACAGGGAAGATCATTTAGTTGCAGCATTCTCATATTTTGATAAAGATGGAAGTGGCTACATTACTCAAGATGAGCTTCAGCAAGCATGTGAAGAATTTGGCATTGGAGATGTCCGCTTGGAGGAAATGATCCGAGAAGCTGATCAGGATAATGATGGACGAATAGACTACAATGAATTTGTGGCTATGATGCAAAGAGGCAATGCTGATTTGGGTAAGAGGGGTCGAAAGGGTAGCACTAGTTTTAGAATTGGTTTTAGGGAGGCACTACCAGTATGCTAA 1245 0.4096 MHHLAGSVNVISIKEAFEDGVAVHVVMELCVGGELFDRIVERGHYTERKAAKLARTIVGVIESCHSLGVMHRDLKPENFLFVSQQEDSPLKAIDFGLSTFFKPGEIFSDVVGSPYYVAPEVLRKRYGPESDVWSAGVIIFILLSGVPPFWGESEHEIFEAILHHELDFSSEPWPSISESAKDLVRKMLVRDPSKRITAYDVLRHPWIQVDGAAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAENLSEEEIAGLKEMFKMIDTDNSGQITFEELKVGLKNFGANLNESEIYDLMKAADVDNSGTIDYGEFIAATLHLNKVDREDHLVAAFSYFDKDGSGYITQDELQQACEEFGIGDVRLEEMIREADQDNDGRIDYNEFVAMMQRGNADLGKRGRKGSTSFRIGFREALPVC* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0705 414 Gene3D Transferase(Phosphotransferase) domain 1 35 213 - -
Apr8g0705 414 Gene3D - 214 390 - -
Apr8g0705 414 ProSiteProfiles EF-hand calcium-binding domain profile. 286 321 IPR002048 GO:0005509
Apr8g0705 414 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 396 - -
Apr8g0705 414 Pfam EF-hand domain pair 267 317 IPR002048 GO:0005509
Apr8g0705 414 ProSiteProfiles EF-hand calcium-binding domain profile. 360 391 IPR002048 GO:0005509
Apr8g0705 414 CDD STKc_CAMK 9 206 - -
Apr8g0705 414 SMART efh_1 254 282 IPR002048 GO:0005509
Apr8g0705 414 SMART efh_1 290 318 IPR002048 GO:0005509
Apr8g0705 414 SMART efh_1 360 388 IPR002048 GO:0005509
Apr8g0705 414 SMART efh_1 326 354 IPR002048 GO:0005509
Apr8g0705 414 Pfam EF-hand domain pair 326 386 IPR002048 GO:0005509
Apr8g0705 414 ProSiteProfiles EF-hand calcium-binding domain profile. 322 357 IPR002048 GO:0005509
Apr8g0705 414 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 1 396 - -
Apr8g0705 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Apr8g0705 414 ProSitePatterns EF-hand calcium-binding domain. 299 311 IPR018247 -
Apr8g0705 414 ProSitePatterns EF-hand calcium-binding domain. 263 275 IPR018247 -
Apr8g0705 414 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Apr8g0705 414 CDD EFh 326 386 IPR002048 GO:0005509
Apr8g0705 414 ProSitePatterns EF-hand calcium-binding domain. 369 381 IPR018247 -
Apr8g0705 414 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Apr8g0705 414 SUPERFAMILY EF-hand 246 387 IPR011992 -
Apr8g0705 414 SUPERFAMILY Protein kinase-like (PK-like) 4 208 IPR011009 -
Apr8g0705 414 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0705 414 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0705 414 Pfam Protein kinase domain 4 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0705 414 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0705 Apr-Chr8 6770001 6773713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0705 1 389 EF-hand Containing Proteins AT3G10660 82.519 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Apr8g0705 Pkinase 4.9e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0705 K13412 - gmx:100800415 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0705 8 6770001 6773713 Apr4g0401 4 3423826 3427476 PCT