Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0690 ATGAGCAACTCAACTGATTCCTCTGGGTTCCTTGGCTCCAATGGCATTAGTGGCTTTGGAATGGGAATAGGAATTTCAATTGGAATTCTTCTTCTCATTACAACCATCACACTCACTTCTTACTTCTGCACAAGGGCACAGATGCCAACTGCCCCAGCTCCTAGGAGAAGCATTACTACTATCTCTGAATACCTTGAGCCACAACACACAACAATTGATGTTGGGCTAGATGAGGCCACAATTATGGGCTACCCAAAAATGTTGTATTCTGAAGCCAAGCTAAGGAAAAGTGATCATACAGCAACATGCTGCTCTATATGTCTTGGAGATTACAAAGGTTCTGATTTGCTTAGGGTTTTGCCTGATTGTGAGCATCTCTTCCATCTCAAGTGCATAGACCCTTGGTTGAGGCTTCATCCTACTTGTCCTCTCTGTAGAACTTCTCCAATTCCAACACCTCTCTCAACGCCTCTGGCTGAAGTCGTCCCATTAGCAACCAGGCGAGATTAA 510 0.4451 MSNSTDSSGFLGSNGISGFGMGIGISIGILLLITTITLTSYFCTRAQMPTAPAPRRSITTISEYLEPQHTTIDVGLDEATIMGYPKMLYSEAKLRKSDHTATCCSICLGDYKGSDLLRVLPDCEHLFHLKCIDPWLRLHPTCPLCRTSPIPTPLSTPLAEVVPLATRRD* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0690 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 150 IPR013083 -
Apr8g0690 169 SMART ring_2 104 145 IPR001841 -
Apr8g0690 169 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Apr8g0690 169 Pfam Ring finger domain 104 146 IPR001841 -
Apr8g0690 169 SUPERFAMILY RING/U-box 83 151 - -
Apr8g0690 169 PANTHER RING-H2 FINGER PROTEIN ATL70-LIKE 4 167 - -
Apr8g0690 169 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 167 IPR045899 -
Apr8g0690 169 CDD RING-H2_PA-TM-RING 103 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0690 Apr-Chr8 6566216 6566725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0690 6 166 C3H Transcription Factor Family AT2G35910 63.580 3.41e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0690 - - gmx:121172638 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0393 4 3363163 3363678 Apr8g0690 8 6566216 6566725 PCT