Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0667 ATGTCCCAATTGAACGGCGCGTACTACGGACCCTCCATTCCGCCGCCGCCGAAATATTACCGGCGGCCAGGGCGCGGTGGCGGGTGCTTCAGCTGTTGCTGCGGATGCATCTTCAACTGCATCCTTAGCATCATATGCAAAATCTTAACCACCATTCTCATCATCGTGGCCATCGTGGCCTTTCTTTTCTGGCTTATCGTGCGCCCCAACGCCCTCAAGTTCCATGTCAGCGACGCCACACTCACACAATTCAGTTACAACAACAACACGCTCCGTCACAACCTTGCCCTTAATGTCACCATCCGAAACCCCAACCGCAGGCTCGGAATCTACTACGACAACATCGAAGCGCTCGCGCTGTACCAGGACGTCAGGTTCGGGTCCCAGACCTTAGGTCCCTTCTTCCAGCACCATAAGAATACAAGCGTGTTGAGCCCTGTCTTCAAGGGCCAGCGCGTGATGCCACTCACTGAGGATCAGGTTTCGGAGCTGAACAAAGAGAAGGGTTCTGGGGTTTATTCCATCGATGTGAAGCTGAATATGATGGTTCGGTTCAAGTTGGGTTTGTTCAAATCCGGGAAGGTGAAGCCCAATATTCGTTGTGAATTGCAGGTTCCTTTGGAATCGCATAACGGAACCTCTTCTGGTGGTGGATTTCAGTTTCAGGATACAGCTTGCGATTGGGATTACAAACGGATGTGGTTCCATTAG 711 0.519 MSQLNGAYYGPSIPPPPKYYRRPGRGGGCFSCCCGCIFNCILSIICKILTTILIIVAIVAFLFWLIVRPNALKFHVSDATLTQFSYNNNTLRHNLALNVTIRNPNRRLGIYYDNIEALALYQDVRFGSQTLGPFFQHHKNTSVLSPVFKGQRVMPLTEDQVSELNKEKGSGVYSIDVKLNMMVRFKLGLFKSGKVKPNIRCELQVPLESHNGTSSGGGFQFQDTACDWDYKRMWFH* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0667 236 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 28 230 - -
Apr8g0667 236 Pfam Late embryogenesis abundant protein 98 201 IPR004864 -
Apr8g0667 236 PANTHER OS05G0367900 PROTEIN 28 230 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0667 Apr-Chr8 6220881 6221641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0667 66 217 SNARE and Associated Proteins AT1G32270 37.255 3.10e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0667 - - aprc:113873272 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0667 8 6220881 6221641 Apr8g0667 8 6220881 6221641 ECH
Apr4g0372 4 3166763 3167941 Apr8g0667 8 6220881 6221641 PCT