Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0633 ATGCTAGGGAAAAAGATGGTGTCATTGAAGAAACTAGCCAAAAAGGTGAAGGCTGTTGGTGGAGCTGACCCTGATCCTCCGTACCAAGAATGTTTGCTCAAAGGGTATGAGGAAGAATCCCCTTCTAGCACAACCCCAACTGGTTTTTTTGCACTTTATGTGGGGGAGGATCGCCAAAGATATGTGGTTCCAACAAGCTACCTTTCTCACCCTCTATTCAAGATGCTGTTAGAGAAGGCATACAACGAGTTTGGGTTTGCTCAGAGGAATGGCCTTGTAGTTCCATGCAGTGTTACCACGTTTCAGGAGGTGGTAAATGCTATAGAATGCAACAATGGCAAGTTTGACTTGGGCAAGATTTTTGAAGAATTTCTTTAA 378 0.4392 MLGKKMVSLKKLAKKVKAVGGADPDPPYQECLLKGYEEESPSSTTPTGFFALYVGEDRQRYVVPTSYLSHPLFKMLLEKAYNEFGFAQRNGLVVPCSVTTFQEVVNAIECNNGKFDLGKIFEEFL* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0633 125 Pfam Auxin responsive protein 36 107 IPR003676 GO:0009733
Apr8g0633 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 125 IPR003676 GO:0009733
Apr8g0633 125 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0633 Apr-Chr8 5813807 5814184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0633 41 111 Calmodulin-binding Proteins AT5G20810 50.704 1.28e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0633 K14488 - gmx:100790208 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0633 8 5813807 5814184 Apr8g0633 8 5813807 5814184 ECH