Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0618 ATGGTGGTGCCAGAATCAGAGATGAACTCTCAAAACGAGGTAGAATCTTCCTTACAATCCGATCAACTACACAACAACAAGAACCATCAATTCTCATCACTGGGAAGACAATCCTCAATATACTCCCTCACCCTCGACGAGTTCCAACACACACTATGCGAAAGTGGCAAGAATTTCGGGTCCATGAACATGGACGAGTTCCTCAGCAGCATATGGAACGCCGAAGAGAACCAGAACCAAGCCATAAACAACTCTTCCAACAACGCCAACAACTTGCCTCTAAGCGAAACCTTAACAGAGAAAGGTATAATAAGGAAACAGCCAAGTCTTCCTCGTCAAGGGTCACTAACGATTCCTGCACCTTTGTGTAGGAAAACAGTGGACGAGGTTTGGTCTGAGATACACAAAGGACAACAATGTCAACAACAAGTCACTGGCGGTAATAACAACAATCCGCAAAATACCGAATCTGCCCCTCGCCAACCTACTTTTGGAGAGATGACTCTGGAGGATTTCTTGATTAAAGCAGGGGTAGTTCGGGAACAGTGTGCAATGCCCATCCATGCTTCACATCAGAATTTTCAGCAGTTTGGCATGTATGCTAATAACAACCCTACAATGTCTCCTTCTTTTGTTGCTAGGCCTATAATGGGAATTGGAGGCGGCGGCGGCTGTGGAAATGTTGTTGTGCCGTCGCCTTTTCAGGCAATGGCTCAGGGTGGTAGTGGCGCATTGGGAGAGTCTCATGGGTATGCTGGAAATGGAAAAAGGGACGGCGGGTACCCGGCGCCGCCGGGGGTTTGCTTTGGTGGGAGGGTGGTGAATGGAGGGGGTGGTTATGCGGCAATGGCGGCGCCGGTGAGCCCGGTTTCGCCGGATGGGATAGGTACGGGTGAGAATTCTGGCGGGCAATTTGGGATGGAGATGGGTGTGTTGAGAGGGAGAAAGAGGGGTCTAGATGGTCCTGTGGAGAAGGTGGTGGAGAGAAGGCAGAGGAGGATGATCAAGAACAGAGAATCAGCGGCCAGATCTAGAGCAAGGAAGCAGGCATACACGGTTGAATTAGAAGCAGAATTGAACCAATTAAAAGAAGAGAACGCGCAACTAAAATTAGCAATGGCCGAGCTTGAGAGGAGAAGAAAACAACAGTGTTCAGAGGAAGGGAACGGGAGAGTCCAAGCCAACACTCAGAAAGCCAAAAGGAAATTAAGATCATTGAGAAGGAACCTAAGTTGCCCTTTATGA 1245 0.4876 MVVPESEMNSQNEVESSLQSDQLHNNKNHQFSSLGRQSSIYSLTLDEFQHTLCESGKNFGSMNMDEFLSSIWNAEENQNQAINNSSNNANNLPLSETLTEKGIIRKQPSLPRQGSLTIPAPLCRKTVDEVWSEIHKGQQCQQQVTGGNNNNPQNTESAPRQPTFGEMTLEDFLIKAGVVREQCAMPIHASHQNFQQFGMYANNNPTMSPSFVARPIMGIGGGGGCGNVVVPSPFQAMAQGGSGALGESHGYAGNGKRDGGYPAPPGVCFGGRVVNGGGGYAAMAAPVSPVSPDGIGTGENSGGQFGMEMGVLRGRKRGLDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLKLAMAELERRRKQQCSEEGNGRVQANTQKAKRKLRSLRRNLSCPL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0618 414 Coils Coil 345 386 - -
Apr8g0618 414 CDD bZIP_plant_BZIP46 329 383 - -
Apr8g0618 414 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 327 379 IPR004827 GO:0003700|GO:0006355
Apr8g0618 414 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 4 413 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Apr8g0618 414 SUPERFAMILY Leucine zipper domain 329 379 IPR046347 GO:0003700|GO:0006355
Apr8g0618 414 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 332 347 IPR004827 GO:0003700|GO:0006355
Apr8g0618 414 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 4 413 IPR043452 GO:0003700|GO:0045893
Apr8g0618 414 MobiDBLite consensus disorder prediction 381 414 - -
Apr8g0618 414 Gene3D - 327 383 - -
Apr8g0618 414 Coils Coil 389 409 - -
Apr8g0618 414 MobiDBLite consensus disorder prediction 1 21 - -
Apr8g0618 414 SMART brlzneu 325 389 IPR004827 GO:0003700|GO:0006355
Apr8g0618 414 MobiDBLite consensus disorder prediction 138 162 - -
Apr8g0618 414 Pfam bZIP transcription factor 329 381 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0618 Apr-Chr8 5674806 5678594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0618 1 384 bZIP Transcription Factor Family AT2G36270 53.349 1.93e-113 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr8g0618 bZIP_1 4.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0618 K14432 - gmx:100790948 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0618 8 5674806 5678594 Apr8g0618 8 5674806 5678594 ECH
Apr4g0320 4 2774198 2779165 Apr8g0618 8 5674806 5678594 PCT