Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0611 ATGGCGGAAGAACACCGATGCCAAGCTCCCGAAGGCCACCGTCTCTGTGCTAACAACTGCGGCTTCTTCGGAAGCCCGGCCACCATGAATCTCTGCTCCAAATGCTACGTTGATATCAGTTTGAAGGAACAAGAAGAAGCGTCCACCAAATCCACCATCGAAACCGCTCTCTCCTCCTCCGCTGCCGCCGCCATGCCTCCGTTATCCACGTCGTCTCCGTCGCCGCCGGCTGTCGATTCCGTGGAATCTGTGCCTCCGGTGGAGGTCGCGTCGAGCTCCGTGGCCGTGGGTTCGGTTTCGGTTGAACCGAACCGGTGCGCGACGTGCCGGAAGCGCGTGGGGTTGACCGGGTTTAAGTGCAGGTGCGGGGTGACGTTTTGTGGGGCCCACAGGTATCCGGAGAAACACGCGTGCAGCTTCGATTTTAAGACGGTGGGGCGAGAGGAGATTGCACGCGCCAACCCTGTGATCAAAGCGGAGAAGCTGCGGAGGATTTGA 498 0.5984 MAEEHRCQAPEGHRLCANNCGFFGSPATMNLCSKCYVDISLKEQEEASTKSTIETALSSSAAAAMPPLSTSSPSPPAVDSVESVPPVEVASSSVAVGSVSVEPNRCATCRKRVGLTGFKCRCGVTFCGAHRYPEKHACSFDFKTVGREEIARANPVIKAEKLRRI* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0611 165 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Apr8g0611 165 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 165 - -
Apr8g0611 165 ProSiteProfiles Zinc finger AN1-type profile. 100 146 IPR000058 GO:0008270
Apr8g0611 165 Pfam AN1-like Zinc finger 106 142 IPR000058 GO:0008270
Apr8g0611 165 Gene3D - 1 65 - -
Apr8g0611 165 MobiDBLite consensus disorder prediction 61 78 - -
Apr8g0611 165 SUPERFAMILY AN1-like Zinc finger 96 160 IPR035896 -
Apr8g0611 165 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Apr8g0611 165 MobiDBLite consensus disorder prediction 61 83 - -
Apr8g0611 165 Gene3D - 79 161 IPR035896 -
Apr8g0611 165 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 165 - -
Apr8g0611 165 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 57 - -
Apr8g0611 165 SMART AN1_Zf_4 106 143 IPR000058 GO:0008270
Apr8g0611 165 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0611 Apr-Chr8 5588408 5589847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0611 1 165 C2H2 Transcription Factor Family AT3G52800 55.882 4.94e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0611 - - lang:109347531 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0611 8 5588408 5589847 Apr8g0611 8 5588408 5589847 ECH
Apr4g0315 4 2721947 2723150 Apr8g0611 8 5588408 5589847 PCT