Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0606 ATGATGGACTCACACAAGCAATTATTTTCCCTCTTATCCATTTCCCTAGTACTTCTACTCCTCTCAGGTATGGCAGGATTGCAATCTGAGGCTCGTTTGCAGAAGGGTCACGAGCTAAATTACGCACCCAAAAAATTGTTCATTTTTGGGGACTCTTATGTTGATACTGGAAACAATAGAAAAGGTCAAGCTAGATCCTGGCAAGTCCCTTATGGCATTACTTTTCCGGGCAAGCCTGTCGGTAGATTCTCCGATGGTAGAGTACTTACAGACTACATTGCTAATTATTTGGGATTGAAATCGCCAATCCCCCATAGATTGAGGAAATTGATGCCGCAACATTTGAAATACGGGATGAACTTTGCATTTGGAGGTACCGGGGTTTTTGATACCTCTTTTAAAGCTCCAAACATGACAACCCAAATCGATATGTTGCAGCAACTCATCAAAGAGAAAGTATACTCTCCCTTAAGTCTCAGCAACTCTGTGGCCCTTGTCTCTGTTGCCGGAAACGATTACACTCATTACGTGGAAACAAATGGCTCTACACAGGGTTTTCCGTCTTTCATCGCCTCACTGATTAATCAAACCGCCACCAATTTAATTCGCATCCAAAGGTTGGGAGTGAAGAAAATCGTTGTGGATAGTCTACAACCCCTTGGATGCCTTCCTGCTTCTACAGCCTCATCCTCATTCCAACAATGTAATAGTACCTTCGACGACCTCGTAGTTCTCCACAACAACCTATTGAAAAAAGCTGTGACCAAGTTGAACCAACAAACCAAGGATCACTCCACCTTCATAATTCTTGACCTTTATGATAGTTTCATGTCAGTGTTGAACCACCCTTCTACTAATCACATTAAGGACCAGTTCAAGCCATGCTGCGTTGGGGTAAGTAGCCAATATCTTTGTGGTAATGTGGATGAGCACAACGTGAAGAAATACAAGGTTTGTGATAATCCCGAATCTGTTTTCTTTTGGGATTCGGTGCACCCATCACAAGCAGGTTGGAATGCAGTTTATAATAAGTTGCAAATGACAAGTGCTCTTCAACAACTCCGCTACTAG 1071 0.4267 MMDSHKQLFSLLSISLVLLLLSGMAGLQSEARLQKGHELNYAPKKLFIFGDSYVDTGNNRKGQARSWQVPYGITFPGKPVGRFSDGRVLTDYIANYLGLKSPIPHRLRKLMPQHLKYGMNFAFGGTGVFDTSFKAPNMTTQIDMLQQLIKEKVYSPLSLSNSVALVSVAGNDYTHYVETNGSTQGFPSFIASLINQTATNLIRIQRLGVKKIVVDSLQPLGCLPASTASSSFQQCNSTFDDLVVLHNNLLKKAVTKLNQQTKDHSTFIILDLYDSFMSVLNHPSTNHIKDQFKPCCVGVSSQYLCGNVDEHNVKKYKVCDNPESVFFWDSVHPSQAGWNAVYNKLQMTSALQQLRY* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0606 356 Gene3D SGNH hydrolase 40 352 IPR036514 -
Apr8g0606 356 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 356 - -
Apr8g0606 356 SUPERFAMILY SGNH hydrolase 42 345 - -
Apr8g0606 356 Pfam GDSL-like Lipase/Acylhydrolase 46 344 IPR001087 GO:0016788
Apr8g0606 356 CDD SGNH_plant_lipase_like 46 345 IPR035669 -
Apr8g0606 356 PANTHER OSJNBB0059K02.9 PROTEIN 1 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0606 Apr-Chr8 5539391 5542768 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0606 33 341 Pollen Coat Proteome AT1G75930 27.928 3.22e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0606 - - gmx:100800932 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0311 4 2687480 2691481 Apr8g0606 8 5539391 5542768 PCT