Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0602 ATGTTACAGAATTTCCCACTACTGATCCTCTTTTGCATCTATTCCTTGCCCACGCTGATACAAGGATCGAATCAACATGAAAGAAAGCCTTACATTGTATACATGGGAGAACTGCCAGTGGCTAACACCTATACCCTGGAAGACCATCACCACAACTTGCTGGCAACTGCGATTGGAGACCAGCAGTTAGCTAGAGAATCCAAAATACATAGCTATGGAAAGAGCTTCAACGGATTCGTTGCACGACTTTTGCCACATGAAGCAGAGAAATTACTAGAGGAGAACAATGTGGTTTCTGTTTTTCCAAATAGATATAACAGATTACACACGACAAGATCATGGGATTTTCTTAGAATGCCTCTAAAAGTGAAAAGACGCTTCAATATAGAAAGCAATATCATTGTCGGTCTGTTAGACACAGGAATTTCGCTTGATTGCCCCAGTTTCAACGATAAGGGGTATGGGCCTCCCCCACGCACATGGAAGGGCAAATGCATGACAGGAGCCAATTTCACCGGATGCAACAACAAATTGATCGGAGCAAAATACTTCAACCTACAAAACTCAACCGAGGGAGATCTTAGCCCTGCCGACGAAGATGGCCATGGCACTCACACCGCGTCGACGGCAGCCGGCGTGGTGGTAAAGGGTGCCAGCCTTTACGGCGTAGGGAAAGGCAACGCGCGTGGCGGCGTGCCAAGTGCCCGCATAGCAATGTACAAAGTGTGTTGGAGTGGGTGCAGTGACATGGATTTGCTGGCTGGTTTTGATGAAGCCATAGCTGATGGTGTCAACCTCATATCTGTGTCATTAGGAGGGACACCAAGGAAGTTCTTCAGTGATCCAATGGCAATTGGAGCATTTCATGCTATGAAGAGAGGGATTCTCACCTCTTGCTCCGCCGGCAACAGTGGTCCTTCCACCATGACAATTGAAAACGTGGCTCCTTGGATTTTGACTGTGGCGGCTTCCGCCACCGATCGGCGATTCACCACCGTGGTAGACCTTGCTGATGGCAAGAAAGCTGCTGGAATATCTATTAACACCTTTTCCCCAGAGAAAAATATGTACCCACTAACTAGTGGAGCCCTTGCTTCCAACGTTAGCGGAGACAGCTATGGCAATGCCAGTGCATGTGATTATGGGACTCTAAGCATGGACAAGGTAAAGGGAAGGATCGTGTATTGCCTTGGCATGGGCAACGAGGACTTCGTCATCAAAGGATTAGGTGGAGTAGGAACCATTGTGAGTGTTTCAGATCAAACAGATTACTCCCCCTCCACCACTATTATTCCAGGGGTCTATGTTGATGCCAAAGCTGGGGGTAAAATCATTGACCTCTACATAAATTCCACCAAAAATGCTCAAGCTGTTATACACAAAACTACAAGTACAAGAATTCCTGCACCATTTGTTGCTTCTTTTTCATCTAGAGGTCCTCAATCCATCACCTTCAACATCCTAAAGCCTGATTTGGCTGCTCCAGGAGTGGATATTCTAGCTGGGTATTCCAAATTAGCAACAATAACAGGTTCCTCTGAAGACAACCGTCGTAACTTTTTTAATATATTATCAGGAACATCTATGGCTTGTCCACATGCAACTGCTGCTGCAGCCTATGTCAAATCTTTCCACCCTGATTGGAGCCCTTCTGCAATTAAATCTGCTCTCATGACCACTGCAACTCCAATGAAAATCAAAGATGACACAAAAGAGCTAGGATCCGGGTCAGGACAGATTGACCCAGTGAGAGCACTGGATCCTGGCTTACTTTACAACATCAACATCAACTCCTATATTGCATTCCTATGCAAAGAAGGCTACAACAGCACCAGCATCGGAATACTAATTGGAAGCAAAGGTTTTGATTGCTCCAGCATTGAGTCTCCATCAGGCACTGATGGAATCAACTACCCTTCTATGCATATTCAGATCATACCTTCAAATTCCAGCATTTCTGCAGTCTTTTATAGGAATGTGACCAATGTTGGATTTAGAAACTCGACTTACAAAGCTAAAGTCACAGCACCAAAGGGTCTTTCCATTGAGGTTATCCCAGACACTTTAAAGTTTAGTGAGTTGAACCAAGAATTGTCGTTCAAGGTTGTCCTTAAGGGGCCTCCAATGCCGAAAGAGACAAAGATATTATCAGCATCACTTGAATGGAATGACTCTAAACACAGTGTAAGAAGCCCAATAGTGGTCTATAAACCGACTTTGTGA 2223 0.4507 MLQNFPLLILFCIYSLPTLIQGSNQHERKPYIVYMGELPVANTYTLEDHHHNLLATAIGDQQLARESKIHSYGKSFNGFVARLLPHEAEKLLEENNVVSVFPNRYNRLHTTRSWDFLRMPLKVKRRFNIESNIIVGLLDTGISLDCPSFNDKGYGPPPRTWKGKCMTGANFTGCNNKLIGAKYFNLQNSTEGDLSPADEDGHGTHTASTAAGVVVKGASLYGVGKGNARGGVPSARIAMYKVCWSGCSDMDLLAGFDEAIADGVNLISVSLGGTPRKFFSDPMAIGAFHAMKRGILTSCSAGNSGPSTMTIENVAPWILTVAASATDRRFTTVVDLADGKKAAGISINTFSPEKNMYPLTSGALASNVSGDSYGNASACDYGTLSMDKVKGRIVYCLGMGNEDFVIKGLGGVGTIVSVSDQTDYSPSTTIIPGVYVDAKAGGKIIDLYINSTKNAQAVIHKTTSTRIPAPFVASFSSRGPQSITFNILKPDLAAPGVDILAGYSKLATITGSSEDNRRNFFNILSGTSMACPHATAAAAYVKSFHPDWSPSAIKSALMTTATPMKIKDDTKELGSGSGQIDPVRALDPGLLYNININSYIAFLCKEGYNSTSIGILIGSKGFDCSSIESPSGTDGINYPSMHIQIIPSNSSISAVFYRNVTNVGFRNSTYKAKVTAPKGLSIEVIPDTLKFSELNQELSFKVVLKGPPMPKETKILSASLEWNDSKHSVRSPIVVYKPTL* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0602 740 Gene3D Peptidase S8/S53 domain 132 599 IPR036852 GO:0004252|GO:0006508
Apr8g0602 740 CDD Peptidases_S8_3 108 562 IPR034197 -
Apr8g0602 740 Gene3D - 327 465 - -
Apr8g0602 740 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Apr8g0602 740 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
Apr8g0602 740 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Apr8g0602 740 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 109 IPR037045 -
Apr8g0602 740 PANTHER CUCUMISIN PROTEIN 20 737 - -
Apr8g0602 740 ProSiteProfiles Serine proteases, subtilase domain profile. 113 586 - -
Apr8g0602 740 CDD PA_subtilisin_like 333 459 - -
Apr8g0602 740 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 737 IPR045051 -
Apr8g0602 740 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 135 145 IPR023827 -
Apr8g0602 740 SUPERFAMILY Subtilisin-like 8 613 IPR036852 GO:0004252|GO:0006508
Apr8g0602 740 Gene3D - 603 737 - -
Apr8g0602 740 Pfam Peptidase inhibitor I9 31 109 IPR010259 -
Apr8g0602 740 ProSitePatterns Serine proteases, subtilase family, serine active site. 526 536 IPR023828 -
Apr8g0602 740 Pfam Fibronectin type-III domain 636 735 IPR041469 -
Apr8g0602 740 Pfam Subtilase family 131 564 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0602 Apr-Chr8 5481508 5487352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0602 7 560 Subtilisin-like Serine Gene Family AT5G03620 60.984 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0602 - - gmx:100816428 1211.82