Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0599 ATGGCGAAGACCTTCAAGTACATCATCCTCGGAGGAGGCGTTGCCGCCGGTTATGCTGCAAGGGAGTTTGCCAAACAGGGACTTAAGCCAGGGGAGTTGGCAATCATATCCAAAGAAGCGGTAGCACCGTATGAACGTCCTGCTCTAAGCAAGGCTTACCTTTTTCCAGAGTCCCCTGCTAGACTTCCTGGGTTCCATGTTTGTGTGGGAAGTGGAGGAGAAAGATTGCTTCCTGAGTGGTACAGTGAGAAAGGGATAGAATTAATTCTTAGTACAGAAATAGTAAAAGCAGATCTTGCTGCAAAATCTCTGATCAGTGCTGGTGGAGAAACATTCAGTTACCAGATTTTGATTATTGCAACTGGCTCAACAGTTATAAGGCTGACAGATTTTGGCGTACAAGGAGCTGATGCCAAAAACATCTTTTATTTGAGGGAGGTTGACGATGCTGACAAATTGTATGAAGCTATCAAAGCAAAGAAAAATGGGAAAGCTGTGGTCGTTGGGGGAGGATACATTGGTCTGGAGCTTAGTGCTGTGTTGAGACTCAACAACATTGATGTTACCATGGTCTACCCAGAGCCTTGGTGTATGCCACGACTTTTTACATCTGGTATAGCTGCATTCTATGAGGGATACTATGCAAATAAGGGGGTCAATATCATTAAAGGAACTGTTGCTGTTGGATTCACTGCTAATTCCAATGGAGAGGTAAAAGAAGTCCAACTTAAGGATGGGAGGGTCCTGGAAGCTGATATTGTTGTTGTTGGTGTTGGAGGAAGGCCTCAAACATCCTTATTCAAAGGGCAGATTGAAGAGGAGAAGGGTGGAATCAAGACTGATTCCTTCTTCAAAACAAATGTCTCTGATGTATATGCTGTTGGTGATGTGGCTACGTTCCCCTTGAAATTGTACGGTGAATTGAGAAGAGTTGAACACGTTGATCATTCTCGCAAATCAGCTGAACAGGCTGTGAAGGCCATTAAGGCAGCTGAGGATGGAAAGACAGTGGAGGAGTATGATTACCTGCCATACTTCTATTCCCGTTCATTTGATCTGTCTTGGCAATTCTATGGCGACAATGTCGGTGACACAGTGCTATTTGGGGACAACAATCCCGAGTCATCAAAGCCCAAGTTTGGTACATACTGGATTAAAGATGGGAAAGTTGTCGGGGCCTTTTTGGAGAGTGGAACTCCAGAGGAGAACAAGGCTATTGCTAAAGTTGCTAGAGTCCAGCCTCCAGTTGAGGATGTGGACCAACTTGCCAAGGAAGGCCTTTCCTTTGCTAGTAAAATATAA 1302 0.447 MAKTFKYIILGGGVAAGYAAREFAKQGLKPGELAIISKEAVAPYERPALSKAYLFPESPARLPGFHVCVGSGGERLLPEWYSEKGIELILSTEIVKADLAAKSLISAGGETFSYQILIIATGSTVIRLTDFGVQGADAKNIFYLREVDDADKLYEAIKAKKNGKAVVVGGGYIGLELSAVLRLNNIDVTMVYPEPWCMPRLFTSGIAAFYEGYYANKGVNIIKGTVAVGFTANSNGEVKEVQLKDGRVLEADIVVVGVGGRPQTSLFKGQIEEEKGGIKTDSFFKTNVSDVYAVGDVATFPLKLYGELRRVEHVDHSRKSAEQAVKAIKAAEDGKTVEEYDYLPYFYSRSFDLSWQFYGDNVGDTVLFGDNNPESSKPKFGTYWIKDGKVVGAFLESGTPEENKAIAKVARVQPPVEDVDQLAKEGLSFASKI* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0599 433 Gene3D - 345 433 IPR016156 GO:0016491|GO:0050660
Apr8g0599 433 PRINTS Pyridine nucleotide disulphide reductase class-I signature 6 28 - -
Apr8g0599 433 PRINTS Pyridine nucleotide disulphide reductase class-I signature 164 189 - -
Apr8g0599 433 PRINTS Pyridine nucleotide disulphide reductase class-I signature 252 266 - -
Apr8g0599 433 PRINTS Pyridine nucleotide disulphide reductase class-I signature 291 298 - -
Apr8g0599 433 SUPERFAMILY FAD/NAD(P)-binding domain 153 328 IPR036188 -
Apr8g0599 433 SUPERFAMILY FAD/NAD(P)-binding domain 2 209 IPR036188 -
Apr8g0599 433 PANTHER APOPTOSIS-INDUCING FACTOR 1 2 433 - -
Apr8g0599 433 Pfam Pyridine nucleotide-disulphide oxidoreductase 6 321 IPR023753 GO:0016491
Apr8g0599 433 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 338 431 IPR016156 GO:0016491|GO:0050660
Apr8g0599 433 Gene3D - 8 324 IPR036188 -
Apr8g0599 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
Apr8g0599 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 114 132 - -
Apr8g0599 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 164 182 - -
Apr8g0599 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 251 267 - -
Apr8g0599 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 276 298 - -
Apr8g0599 433 PANTHER MONODEHYDROASCORBATE REDUCTASE-LIKE ISOFORM X1 2 433 - -
Apr8g0599 433 Gene3D - 128 259 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0599 Apr-Chr8 5450140 5454037 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0599 111 311 EF-hand Containing Proteins AT4G28220 25.523 1.85e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0599 K08232 - gmx:100787700 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0515 4 4281978 4287856 Apr8g0599 8 5450140 5454037 PCT