Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0598 ATGGGTTCATTCTCTGGCACTTGTGAAATTGTTGAAGCAAGGGAAGACCTAAATAGAGAGAAAGATGCAGGGATATATCAGTCCAATTCTGGATCTAACATGACTGGGAAAAATGAGAGACTTTCTGTACTGAAACTGGGACACAAGGATAATCTTGATGAAGATATTAATAAGCTGTTTGAATCAATTACTCTTAAATCTTCATCAAGGGATTTGAGTTTCTTACAAGATGGTACAAGCCCTAAGATGAAAAGTGCATTGAAAAAGCCAATCACAGTGGGTGTTTCTCGTTCCCCACGAGTTGGAACTTCTGAGCCTGTGACTTTGAAGCAGGCATTAAGAGACCTATGTATATCTAAGGCATCAGAAATGGCAGCAATGAAAAGATTATCAAAGTCAACTGCTTCTCCGAGAATATCTGAGGTTGGGAAGATACAGACATTGTACAATTCAGTTGTAGCTGAGGGTAGAAGATCTGGACCTTCTAATGTTGAGAGGAAGGAGAGTACGATTGAAATATCTCTAGTGCCAGAAGAAAGCACATCACTTTCCTTGGATAGAATTTCCCACTCTCATCAAACTACTAAAAGCACATCACTGAGCCAAAATATTCAATCTTCCAAAATTGCTGTTGGAACTACACAAAATGATTCTGGGGCTTCATTGATGCAAAGTGACTTGGCTTGTTTGTCAAGTAAAGTTGGGGTTCCATCACAGCCATTGGAGCCTGCTCAAATAGAAAAACAAACATCTACATCTTCTCCATCTAGTTGTAAGGCCAATGGAAGTAAATTAGAGTTTCCTGAACCAGCAATTGATTCTTCCACTAAAAAATCAGCAAATAAAGCATCTGTGTCAAAGAATGGACGGAAAGGTAGGTTACAAACAGTATCTTCCTCATCTACTTCAGTGAATGGCAATAGAGTGTGCAAACTGTCACGCAATTCCCCCCGTACAGTCAAATCAGTTATCAAGAACAAGAATTTGGGTAAGAAGAAACCAAAGCAGGATTCAGTTTCTGCTTTTTTTGATCCTACATCCAATGAAGTAAATAGCAAGTCAGTTCCTGATACAACTCAACTTGTTTGTGAGAGATGTTGGTGTGCCATAGAAAACAACAAAGGTATTACACCGTTGGACTCTATTAGTCCTGGGGAAGGAATAAACTTGAGTAATGTGCACTCTGGCTCAGCTTCAGCTGACTGTAATAGCAGCAGAGTAGTTAGAAAAGTGAAAAAGAACACTATATTGAAAGAGCAAATTGAATTGTCACAAAGTTCAAAGAGTAGCCAAGGTGACTACAGTAGTAGTACAAGTACGAGTGATGAGAGTAATGTCAGTGGGTCTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATTTTAGATGGGAAGCCATACGACATGCTCAAATGCAGCATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTGAGGAAGCTAGGTTGTGGAGACATTGGGACTGTATATCTTGCTGAACTAATTGGCAAAAATTGTTTGTTTGCTATTAAGGTGATGGACAACGAATTTTTGGCAAGAAGGAAGAAGATGCCCAGAGCTCAAACTGAAAGAGAAATATTAAGGATGCTGGATCATCCTTTTCTTCCAACACTATATGCACAGTTTACATCAGATAATTTGTCATGTCTGGTTATGGAGTATTGTCCAGGTGGTGATCTGCATGTTCTACGGCAGAAACAACTTGGCAGAAGTTTTTCAGAGGCAGCAGCAAGGTTTTATGTTGCTGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTTGGAGTGGTTTACCGTGATTTAAAACCTGAAAACATTCTTGTTCGAGAAGATGGCCACATTATGCTTACAGATTTTGACCTGTCTCTGAGGTGTGATGTTAGCCCAACGCTTCTGAAATCATCTTCCGATGTGGATCCTGCTAAGATTTCTGGTCCTTGTGCACAATCGAGTTGCATTGAACCATTCTGCATTGAACCATCCTGTCAAGTTCCATGTTTCAGCCCTAGATTCTTACCTCCTGCTGCAAGAACAAGGAAACTAAAAGCTGATCTTGCTACTCAGATCAGATCGTTGCCACAGCTTGTGGCTGAGCCCACGGATGCAAGATCAAATTCATTTGTTGGTACTCATGAATACTTGGCGCCTGAGATCATCAAAGGTGAGGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTTTATGAGCTTTTATATGGTAGAACACCCTTTAAAGGTTCTAATAATGAAGAAACACTAGCCAACGTGGTGTTGCAAAGTTTCAGATTCCCGGACACCCCATTCGTCAGTTTCCAAGCAAGGGATCTTATTCGAGGGTTGTTGGTTAAAGAACCTGAAAACCGGTTGGGTTCAGAGAAAGGAGCTGCAGAGATAAAACAGCATCCCTTCTTCGAGGGCCTTAATTGGGCCTTGATCCGTTGTGCTATCCCACCAGAACTTCCAGACTTTGAGTTTGGATTTTCAGAAATGACGTCGCAGTCACAGGGACAAGGCAGTAAATATTTGGGCTGTAGTGCAACAGGAGAGCAAGTGGAATTTGAGTTGTTTTAA 2598 0.4119 MGSFSGTCEIVEAREDLNREKDAGIYQSNSGSNMTGKNERLSVLKLGHKDNLDEDINKLFESITLKSSSRDLSFLQDGTSPKMKSALKKPITVGVSRSPRVGTSEPVTLKQALRDLCISKASEMAAMKRLSKSTASPRISEVGKIQTLYNSVVAEGRRSGPSNVERKESTIEISLVPEESTSLSLDRISHSHQTTKSTSLSQNIQSSKIAVGTTQNDSGASLMQSDLACLSSKVGVPSQPLEPAQIEKQTSTSSPSSCKANGSKLEFPEPAIDSSTKKSANKASVSKNGRKGRLQTVSSSSTSVNGNRVCKLSRNSPRTVKSVIKNKNLGKKKPKQDSVSAFFDPTSNEVNSKSVPDTTQLVCERCWCAIENNKGITPLDSISPGEGINLSNVHSGSASADCNSSRVVRKVKKNTILKEQIELSQSSKSSQGDYSSSTSTSDESNVSGSSCGNRPHMSKDFRWEAIRHAQMQHGVLGLRHFNLLRKLGCGDIGTVYLAELIGKNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEAAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSSDVDPAKISGPCAQSSCIEPFCIEPSCQVPCFSPRFLPPAARTRKLKADLATQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSFRFPDTPFVSFQARDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAIPPELPDFEFGFSEMTSQSQGQGSKYLGCSATGEQVEFELF* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0598 865 MobiDBLite consensus disorder prediction 181 204 - -
Apr8g0598 865 MobiDBLite consensus disorder prediction 243 355 - -
Apr8g0598 865 SUPERFAMILY Protein kinase-like (PK-like) 456 832 IPR011009 -
Apr8g0598 865 CDD STKc_phototropin_like 479 831 - -
Apr8g0598 865 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Apr8g0598 865 Pfam Protein kinase domain 710 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0598 865 Pfam Protein kinase domain 482 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0598 865 MobiDBLite consensus disorder prediction 422 453 - -
Apr8g0598 865 Gene3D Phosphorylase Kinase; domain 1 479 560 - -
Apr8g0598 865 Gene3D Transferase(Phosphotransferase) domain 1 561 629 - -
Apr8g0598 865 MobiDBLite consensus disorder prediction 340 355 - -
Apr8g0598 865 MobiDBLite consensus disorder prediction 274 323 - -
Apr8g0598 865 MobiDBLite consensus disorder prediction 243 261 - -
Apr8g0598 865 ProSiteProfiles Protein kinase domain profile. 481 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0598 865 SMART serkin_6 481 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0598 865 Gene3D Transferase(Phosphotransferase) domain 1 706 827 - -
Apr8g0598 865 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 865 - -
Apr8g0598 865 PANTHER FLIPPASE KINASE 1-RELATED 1 865 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0598 Apr-Chr8 5416508 5422867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0598 1 865 AGC Kinase Gene Family AT2G36350 51.402 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr8g0598 Pkinase 2.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0598 - K08286 gmx:100813470 1419.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0131 4 1125429 1126867 Apr8g0598 8 5416508 5422867 PCT
Apr4g0305 4 2639025 2644239 Apr8g0598 8 5416508 5422867 PCT