Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0596 ATGGCTCAAAAGCACTTGCGAGAGCTACTGAAGGAGGATCAGGAACCCTTCCTTCTAAAGAACTACATTTCAGAGAGGCGTAGCCAACTGAAAAGGCCTTCCCCAAACACAACTTTACAACTGAAGAAACAAAAGCCAAAGCCCCCAAACTTCCCCATTAACCTCTGCAAAAACGCATGCTTCACAACACCAGACATCACAAAATCCCCTCTCTTCGAATTCGCATCCCCATCAAAGAGCCCCGCCAGCACTGCAGCACTACTCCTCGAAGCCGCACTAAGGATCCAAAAACACTCAAACACAAAACCCCACAACACCACCTTCGGCCTATTCGGGTCCTTCTTCAAGAGACTAAAGAACCGAAAGAAGGAGATAGACGGTGGCAAGGTGTCGGTGAAGGATATCTTAAGGTGGGATTCTTCTAAAAAAGGTTGTTCTAAGAAGAACCACGATGATGTCGCCGAGGTGGTGGGATCCATGTGTTCTTGCAATGGAAGGCCTAGTAGTGCTCTTTGGTCGGAGAGCAACGAGGACAAATCGTTGGACTTGGAAACTTCGAGTAGTGAACACTCTGTTGAAGAGATTGGGTTTGTGAAGAAGCAGGAACAAAGCGCTCAGTGTTCTTCCTTCGATGATCACAGCTTCTTCTGTGAAGGCCCTTTTCGTTTTGTCCTCCAACAGAGCCCCTCCTACTCTTCCGGTCATCGTACGCCGGAATTTTCATCGCCGGCGGCGTCGCCGAGTCGCCACAGAACACAGGACAAAGAAAGTAATGGTGCTGATGGCGTCAACAAATTCCAATCGGGGGAAGTAGAGGAAGATAAGGAACGGTGCAGTCCAGTGTCTGTTTTAGACCCACCCTTCGAGGATGATGATTATGATGATGATGATGATGATGATGATGGGCATGAAAACGACGATATTGAAGAGGATGGTTTTGATTTGGAGTGTAGCTATGCCAATGTACAACGAACTAAGCAGCAGCTATTAGACAGGCTTTGTAGATTTGAGAAACTTGCAGAGTTAGATCCAGTAGAACTTGAGAAAAGAATGCTAGATCAAGAAGAGAACAAGTATGAAACATTTATTGAAGAGGAAGATTATGAAGACAATGACAGGGAAAGATCATGTGAAGAAAAGGCCCAGAGAGAGATAGTCACTGAAATCCTCTGCCAATCAAGAGTTCATGACAAATGGCAAGCCCCAGAAGAGCTTAAGGGACTTGTTTATGATCTCATTATGGAGGAAGAGAGAGAACTTAGTTCTTCACATGACAGGAACATGGTTATAAGAAGGGTTTGTAAGAGGCTGGAATTGTGGAAAGAAGTGGAGTCCAACACCATTGATATGATGATAGAAGAGGACTTTTCTAGAGAGGAAGGTAGGTGGAAGAAAAATGCTGAGCAGAGAATGGAGCTAGCTGGGGAACTTGAGGTTGCAATCTTGTGCTTTCTAGTGGAGGAACTTTCAGAGGAACTAGTTTGTTAA 1488 0.453 MAQKHLRELLKEDQEPFLLKNYISERRSQLKRPSPNTTLQLKKQKPKPPNFPINLCKNACFTTPDITKSPLFEFASPSKSPASTAALLLEAALRIQKHSNTKPHNTTFGLFGSFFKRLKNRKKEIDGGKVSVKDILRWDSSKKGCSKKNHDDVAEVVGSMCSCNGRPSSALWSESNEDKSLDLETSSSEHSVEEIGFVKKQEQSAQCSSFDDHSFFCEGPFRFVLQQSPSYSSGHRTPEFSSPAASPSRHRTQDKESNGADGVNKFQSGEVEEDKERCSPVSVLDPPFEDDDYDDDDDDDDGHENDDIEEDGFDLECSYANVQRTKQQLLDRLCRFEKLAELDPVELEKRMLDQEENKYETFIEEEDYEDNDRERSCEEKAQREIVTEILCQSRVHDKWQAPEELKGLVYDLIMEEERELSSSHDRNMVIRRVCKRLELWKEVESNTIDMMIEEDFSREEGRWKKNAEQRMELAGELEVAILCFLVEELSEELVC* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0596 495 MobiDBLite consensus disorder prediction 28 44 - -
Apr8g0596 495 Coils Coil 345 365 - -
Apr8g0596 495 MobiDBLite consensus disorder prediction 228 248 - -
Apr8g0596 495 PANTHER OS04G0572500 PROTEIN 1 495 - -
Apr8g0596 495 MobiDBLite consensus disorder prediction 228 311 - -
Apr8g0596 495 MobiDBLite consensus disorder prediction 24 48 - -
Apr8g0596 495 MobiDBLite consensus disorder prediction 287 311 - -
Apr8g0596 495 PANTHER - 1 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0596 Apr-Chr8 5385031 5388655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0596 2 289 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 42.771 4.49e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0596 - - gmx:100782984 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0596 8 5385031 5388655 Apr8g0596 8 5385031 5388655 ECH
Apr4g0295 4 2482782 2486162 Apr8g0596 8 5385031 5388655 PCT