Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0595 ATGTTCTCTGCCAACCGCGCCACACAATGTAAACTTATAAAAGCGTTTACATTGTCCAAGTCAATTAACTTGATACAGAAGATGCAAAAACGAAGGGCTGGGAGGAGGAAGTTCCACGAGACGCGTCACCCAGTTTACAAAGGAGTGAGGCAGAGGAACGGGAAGTGGGTGTGTGAGCTACGACAGCCCAATAACAAAAAGACACGTGTCTGGCTGGGAACCTTTGAGCACCCCGACATGGCAGCTATAGCGTACGATGTTGCTGCCTTGGCTTTCAAGGGTGATGCTGCTTCCTTAAATTTCCCACACGCAGCTACCTCGTTGCCGCGTCTTAATTCCGGAACTTCTTCCATCAGAGCCATTCAGTTTGCGGCAATGAAAGCAGCTGAAAGGCACTTCTGTTCCCAGATTCAAAGAGATAATAATCAAAATAATAATGATGATTTGGAGTTGTCCATAGAGGTGGGTTTAGAGGAAGATTCTAGAAGCTTCTTCTGGGATGAAGAGGAAGTGTTTAACATGCCAGGTTTGATGAATAGCTTGGCAGAAGCATTGATTATCACACCGCCGGCGTTGCAGACAGGGTTCAATTGGGTTGGTGCGGAAACTACCATTGACTTGACACTATGGGAAACGGATCATTTTGGTGAACCCTAA 657 0.4642 MFSANRATQCKLIKAFTLSKSINLIQKMQKRRAGRRKFHETRHPVYKGVRQRNGKWVCELRQPNNKKTRVWLGTFEHPDMAAIAYDVAALAFKGDAASLNFPHAATSLPRLNSGTSSIRAIQFAAMKAAERHFCSQIQRDNNQNNNDDLELSIEVGLEEDSRSFFWDEEEVFNMPGLMNSLAEALIITPPALQTGFNWVGAETTIDLTLWETDHFGEP* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0595 218 Gene3D AP2/ERF domain 45 104 IPR036955 GO:0003700|GO:0006355
Apr8g0595 218 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 34 211 - -
Apr8g0595 218 SUPERFAMILY DNA-binding domain 45 103 IPR016177 GO:0003677
Apr8g0595 218 CDD AP2 46 104 IPR001471 GO:0003700|GO:0006355
Apr8g0595 218 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Apr8g0595 218 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Apr8g0595 218 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Apr8g0595 218 PRINTS Ethylene responsive element binding protein signature 84 104 IPR001471 GO:0003700|GO:0006355
Apr8g0595 218 Pfam AP2 domain 44 94 IPR001471 GO:0003700|GO:0006355
Apr8g0595 218 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 34 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0595 Apr-Chr8 5379553 5380296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0595 21 210 AP2-EREBP Transcription Factor Family AT4G25470 42.268 1.72e-42 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr8g0595 AP2 3.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0595 - - aprc:113870892 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0595 8 5379553 5380296 Apr8g0595 8 5379553 5380296 ECH
Apr8g0595 8 5379553 5380296 Apr4g0293 4 2461778 2462429 PCT