Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0581 ATGGAACCATCACTGAACAACACTGTTTCTTCAGGGTCATCCCCTCCTCCGGTGACAAACTCTTTGCCTCAAGTAATGAACATGAACATGAGCATGAACATGAACGTGGGTAGCTCCGAAACAACACCAACACCAACACCAGCATCAGTAACAGCACCAGCACCACCTCCAACAACAACTGTTCCTGCAGTGCCTACAACAACAACACCGGGAAGCACCGGAGGACAAGGGAGCTTCGATTTGTTTGGTAAAAAGAAGAGAGGGAGGCCAAGAAAATATGATGCAGATGGGAACCTGAGGTTGAGTGCAACACAACCACCCGCACCACCGGGCTTCACCTTGTCCACATCTTCTGAGTTTTCTTCCAAAAGGGGTCGTGGCAAACACGCTGCGTTTGCCAACTATCAACTCTTTTCTTCTTTTGGTGAGGTGTTTGCAAGCACTGCTGCTGGGGATTTTACACCGCATGTGGTGACTGTTTATACTGGAGAGGATGTTGCTGGAAAGATCATGTCATTTGCCCAGAAGGGTCCAAGAGGAATATGCATTCTCTCTGCTAACGGAGCTATCTCAAATGTCACCATACGCCAACCTGGTTCTTCTGGTGGCATACTGACTTACGAGGGCCGATTTGAGATTTTATCTTTGTCTGGATCATTCACGGTTTGTGACAATAATGGCATGAAAGGTCGAAGTGGTGGATTGAGTGTCTCACTGGCTGGCCCTGATGGTCGGGTCATAGGAGGTGGTGTTGCTGGTCTATTAACCGCTGCCGGCCCCATCCAAATTGTAGTAGGAAGTTTCATGCAAAATGGTTACAAGACACATAAAAGGAAGTATCAACGCGAACATACAGTGGCCTCCCCTACTTCAGTTGGTCCAGAGGCAGTGACAGCAGCAAGACCTATCTCACAAGCAAATGCTGATGGTGAAAACTTTATGATACCAATGTCTCAGTTACCGGATCAAAACCAGAGAGAATCTGTCAGTGTTACAAGTGATAAACAGAATGTAGATGCCACACCTGATGCTGCTACTTGGAATGGTTCTGAAGAATTTTCAGATCAGAGGACATCCCCAGATATCAATATATCTTTGCCTGATGAATAG 1110 0.4676 MEPSLNNTVSSGSSPPPVTNSLPQVMNMNMSMNMNVGSSETTPTPTPASVTAPAPPPTTTVPAVPTTTTPGSTGGQGSFDLFGKKKRGRPRKYDADGNLRLSATQPPAPPGFTLSTSSEFSSKRGRGKHAAFANYQLFSSFGEVFASTAAGDFTPHVVTVYTGEDVAGKIMSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEGRFEILSLSGSFTVCDNNGMKGRSGGLSVSLAGPDGRVIGGGVAGLLTAAGPIQIVVGSFMQNGYKTHKRKYQREHTVASPTSVGPEAVTAARPISQANADGENFMIPMSQLPDQNQRESVSVTSDKQNVDATPDAATWNGSEEFSDQRTSPDINISLPDE* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0581 369 MobiDBLite consensus disorder prediction 322 363 - -
Apr8g0581 369 SUPERFAMILY AF0104/ALDC/Ptd012-like 151 275 - -
Apr8g0581 369 MobiDBLite consensus disorder prediction 1 47 - -
Apr8g0581 369 CDD DUF296 154 268 IPR005175 -
Apr8g0581 369 MobiDBLite consensus disorder prediction 1 120 - -
Apr8g0581 369 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 27 368 - -
Apr8g0581 369 Gene3D - 155 287 - -
Apr8g0581 369 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 27 368 IPR039605 GO:0003680
Apr8g0581 369 MobiDBLite consensus disorder prediction 48 63 - -
Apr8g0581 369 Pfam Plants and Prokaryotes Conserved (PCC) domain 155 269 IPR005175 -
Apr8g0581 369 ProSiteProfiles PPC domain profile profile. 150 292 IPR005175 -
Apr8g0581 369 MobiDBLite consensus disorder prediction 322 369 - -
Apr8g0581 369 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0581 Apr-Chr8 5213258 5216944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0581 84 337 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 48.507 6.13e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0581 - - gmx:100779227 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0581 8 5213258 5216944 Apr8g0581 8 5213258 5216944 ECH