Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0577 ATGAACCATCACCACCTCCTCTTCCTCTTCTTTCTATTTCTCTTCCCATTTGTAACACTAACTCTCCACCACAATGACACACGCGCGCTCACCCTCTTCCGCCGCACCACCGACTCACACGCCTACCTCCTCCAAAACTGGACCGGCCCCGACGCATGCACCGGCGCGTGGCGGGGCGTGTGGTGCTCCTCGAATGGGCGCGTCACCTCACTCTCCCTCTCTTCTCTCAACCTCCGAGGCCCCGTTGACGCTCTCACTCCTCTCACCCATCTCCGCCTCCTCGACCTTCACGACAACCGCTTAAACGGCACCGTTTTGTCTCTTTTCTCCAACTGCACTAACCTAAAACTCCTCTATCTCGCTGGCAACGATTTTTCCGGCGAAATCCCGCCGGAAACACCCTCCCCAAAAGGCCTCATCCGCCTCGACCTCTCCGACAACAACATTCACGGAAACGTTGACTTTCTCTCTAATTTGACTAACCTCGTAACCCTAAGACTCCAAAACAACCTTCTCACAGGCCAAATACCCGATCTCTCTTCCTCCATGCACAATCTCAAAGAACTCAACATGACAAATAACGAGTTCTTCGGTCACTTACCTAACACCATGCTCAACAAGTTCGGAGCTTCAAGCTTCTCCGGAAACGAAGCTCTATGTGGTGCAACTCCATTACCCGTTTGTTCCTTCACGACAACCCCTCCTTCTTCTTCTGATAACGATAACGACAACAACAATGAACCAAATCAAACGGTTCCTTCAAACCCAAGTTCATTCCCAGAAACAAGCGTGATTGCTAGACCGGGTAGTAAAAAACCACATAAAGGGTTAAGTCCTGGTGCAATTGTGGCCATTGTGGTTGCAAACTGTGTAGCATTGCTTGTGGTTACTTCGTTTATAGTGGCTCATTGTTGTGCAAGAGGAAGAGGGTCGAGTTCTATAGTGGAGAGTAGTGAGAGTGGGAAGAGGAAGAGTTATGGGAGTGAGAAGAAGGTGTATGCAAGTGGTGGAGGAGAGAGTGATGGGAGTGATAGGAGTAGGCTTGTGTTTTTCGATAGGAGGAGTGAGTTTGAGTTGGAGGATTTGTTGCGTGCTTCTGCAGAGATGCTTGGAAAGGGTAGTTTGGGAACTGTTTATAGGGCTGTGCTTGATGATGGGTGCACTGTGGCTGTGAAGAGGCTTAAGGATGCTAACCCTTGTGCTAGGCATGAGTTTGAACAGTATATGGATGTTATTGGTAAGCTCAATCATCCTAACATTGTTAGACTCAAGGCTTATTACTATGCCAAGGAAGAAAAGCTTCTTGTCTATGATTATCTCTCTAATGGAAGCTTGCATGCTCTTCTTCATGGGAACCGCGGTCCGGGAAGAATTCCATTGGATTGGACTACTAGAATAAGCTTGGTATTGGGGGCAGCAAGAGGCCTTGCAAAGATCCATGCAGAGTACAGCTCAGCTAAAGTGCCTCATGGGAACGTGAAATCTTCAAACGTGCTTCTTGACAAGAACGGCGTTGCTTGCATCTCTGACTTTGGACTATCACTTCTCTTGAACCCCGTTCACGCCATTGCAAGATTGGGAGGGTACAAAGCACCCGAACAAGAACAACAGAAGAGGCTGTCTCAGCAAGCTGACGTGTACAGTTTTGGGGTGTTGCTGTTGGAAGTTCTCACAGGAAAAGCTCCTTCATCACAGTACCCTTCACCAGCTCGTCCAAGAATGGATGAAGAAGAACAAAGCGTTGATCTTCCCAAATGGGTTCGCTCAGTTGTGAAGGAAGAGTGGACTGGAGAGGTGTTTGACCAAGAACTCTTGCGCTACAAGAACATTGAGGAAGAGCTTGTGTCAATGCTGCATGTTGGCTTGGCTTGTGTGGCGGCACAGCCAGAGAATAGGCCAACTATGGCACAAGTTGTGAAGATGATTGAGGATATTAGGGTGGAGCAATCTCCTCTTGGTGAGGACTATGACGAATCCCGCAATTCACTTTCACCTTCAATTCCCACCACTGAAGATGGTCTAGCTTAG 2028 0.4852 MNHHHLLFLFFLFLFPFVTLTLHHNDTRALTLFRRTTDSHAYLLQNWTGPDACTGAWRGVWCSSNGRVTSLSLSSLNLRGPVDALTPLTHLRLLDLHDNRLNGTVLSLFSNCTNLKLLYLAGNDFSGEIPPETPSPKGLIRLDLSDNNIHGNVDFLSNLTNLVTLRLQNNLLTGQIPDLSSSMHNLKELNMTNNEFFGHLPNTMLNKFGASSFSGNEALCGATPLPVCSFTTTPPSSSDNDNDNNNEPNQTVPSNPSSFPETSVIARPGSKKPHKGLSPGAIVAIVVANCVALLVVTSFIVAHCCARGRGSSSIVESSESGKRKSYGSEKKVYASGGGESDGSDRSRLVFFDRRSEFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCARHEFEQYMDVIGKLNHPNIVRLKAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLAKIHAEYSSAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYKAPEQEQQKRLSQQADVYSFGVLLLEVLTGKAPSSQYPSPARPRMDEEEQSVDLPKWVRSVVKEEWTGEVFDQELLRYKNIEEELVSMLHVGLACVAAQPENRPTMAQVVKMIEDIRVEQSPLGEDYDESRNSLSPSIPTTEDGLA* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0577 675 MobiDBLite consensus disorder prediction 231 275 - -
Apr8g0577 675 Gene3D Transferase(Phosphotransferase) domain 1 440 663 - -
Apr8g0577 675 Gene3D Ribonuclease Inhibitor 137 229 IPR032675 -
Apr8g0577 675 Pfam Protein kinase domain 368 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0577 675 MobiDBLite consensus disorder prediction 650 675 - -
Apr8g0577 675 ProSiteProfiles Protein kinase domain profile. 364 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0577 675 SUPERFAMILY L domain-like 24 206 - -
Apr8g0577 675 Gene3D Phosphorylase Kinase; domain 1 340 439 - -
Apr8g0577 675 SUPERFAMILY Protein kinase-like (PK-like) 368 642 IPR011009 -
Apr8g0577 675 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 666 - -
Apr8g0577 675 MobiDBLite consensus disorder prediction 231 264 - -
Apr8g0577 675 Gene3D Ribonuclease Inhibitor 25 136 IPR032675 -
Apr8g0577 675 PANTHER LRR RECEPTOR-LIKE KINASE 18 666 - -
Apr8g0577 675 CDD STKc_IRAK 370 645 - -
Apr8g0577 675 MobiDBLite consensus disorder prediction 312 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0577 Apr-Chr8 5175120 5177714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0577 19 671 Receptor kinase-like Gene Family AT2G36570 64.793 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr8g0577 Pkinase 5.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0577 - - gmx:100804135 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0577 8 5175120 5177714 Apr8g0577 8 5175120 5177714 ECH
Apr4g0274 4 2294563 2297330 Apr8g0577 8 5175120 5177714 PCT