Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0576 ATGGCCTCTTGCGACGACGACGACGATTTCTCACTTCTCCGTGACGACAACCACCCCCTCCACCACCAACCTTACGCGCCTCACCACCACTTCTCCCCCTCCGCCGTCGCCGTCGCCTCCGTCCCGCCGAAACCCGTCGCTAACGACGCCGAAGACTACGGAAATCCTTTCGACGACGACGGCGGGAGCGAGAAGAGGAAGGAGTGCGAGGAGATCGGCGACGGAACGACGTCGTACGGCTTCAACAAGAGATCGAAGGCGCCTCCGAGCAGTACCGCTGGCGCTGAGTACCGGAAGGACAGGGAAGAGTGGAGCGACACGGCGATTGTGTGCCTCCTCGAAGCTTACACGGAGAAGTTCACACAGCTGAATCGGGGGAACCTGAGGGGAAGGGATTGGGAAGATGTTGCGGCGGTGGTGAGCGAGCGATGCGAGAACCAATCGAAAAGCGTAGAGCAGTGTAAGAACAAGGTGGATAACCTGAAGAAGAGGTACAAATTAGAGAGACATAGGATGAGTAGTGGCTGCATTTCCACCAGTCCCTGGCCTTGGTTCAAGCAACTGGAACAAATCGTGGGAAATTCTTTGCCGGCGAAGTTCGCCGATGAGGATAAAGCGGTTGTTTCAGCCGGAACTTCACCCAGGCAATCGAAGAGATATGGAGTGGCAACACCCAGCAGTGGAGGTCAAGCAAATAACATGAAGTCCAAAGCATTGTCAAACCTTAGATGGCGGAGGGTAGTCCTCAAGATTAGTGGAGCGGCACTTACTGCATCTGATACCTGCAATATTGACCCTAAGGTGGCCATGTTAGTTTCAAGAGAAGTTGCCAAAGCTTCCCGCCTTGGTGTGGAGGTGGCAATTGTTGTTGGAGGTCGCAATTTCTTCTGTGGAGATGCATGGGTAACTGCAACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGTATGATGGCAACTGTGATGAATTCAATATTGCTCCAATCAACTCTAGAGAAGATGGGTGTCCAGACTCGCGTACAAACCTCAGTTGCCATGCAGGAGTTTGCTGAACCATACAATAGGCAGCGGGCCATCAGACATCTCGAGAAAGGAAGAGTTGTTATATTTGGTGGCATTGGTTTTGGCACTGGCAATCCACTTTTCTCCACTGACATAGCTGCAGCTCTTCGTGCTTCAGAGCTTAATGCTGAGGCAGTCCTCAAGGGTACTAACGTAGATGGTGTATATGACCGCAACTCACGAGATAACAATTTCACTTTTGAACATATATCCTTCAGGGAGCTGGGGTCAAGAGGCGTCACTGCTATGGATGTGTCAGCACTGACATTCTGTGAGGAAAATGCTATTCCTGTGGTGGTTTTTAATCTACTGGAGCCTGGGAACATCTCAAAAGCTCTGTGTGGAGAACAAGTTGGCACTCTAATTGACCAAACTGGAGCAATAAGCTAA 1452 0.5103 MASCDDDDDFSLLRDDNHPLHHQPYAPHHHFSPSAVAVASVPPKPVANDAEDYGNPFDDDGGSEKRKECEEIGDGTTSYGFNKRSKAPPSSTAGAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEDVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLERHRMSSGCISTSPWPWFKQLEQIVGNSLPAKFADEDKAVVSAGTSPRQSKRYGVATPSSGGQANNMKSKALSNLRWRRVVLKISGAALTASDTCNIDPKVAMLVSREVAKASRLGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSVAMQEFAEPYNRQRAIRHLEKGRVVIFGGIGFGTGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDRNSRDNNFTFEHISFRELGSRGVTAMDVSALTFCEENAIPVVVFNLLEPGNISKALCGEQVGTLIDQTGAIS* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0576 483 MobiDBLite consensus disorder prediction 1 99 - -
Apr8g0576 483 MobiDBLite consensus disorder prediction 58 73 - -
Apr8g0576 483 CDD AAK_UMPK-PyrH-Ec 245 477 IPR015963 GO:0005737|GO:0006221|GO:0033862
Apr8g0576 483 Pfam Myb/SANT-like DNA-binding domain 101 191 IPR044822 -
Apr8g0576 483 Gene3D - 104 167 - -
Apr8g0576 483 PANTHER URIDYLATE KINASE 62 483 - -
Apr8g0576 483 SUPERFAMILY Carbamate kinase-like 243 476 IPR036393 -
Apr8g0576 483 MobiDBLite consensus disorder prediction 7 23 - -
Apr8g0576 483 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 62 483 IPR011817 GO:0006221|GO:0009041
Apr8g0576 483 Hamap Uridylate kinase [pyrH]. 242 477 IPR015963 GO:0005737|GO:0006221|GO:0033862
Apr8g0576 483 MobiDBLite consensus disorder prediction 214 234 - -
Apr8g0576 483 Coils Coil 144 171 - -
Apr8g0576 483 Gene3D - 234 482 IPR036393 -
Apr8g0576 483 Pfam Amino acid kinase family 246 456 IPR001048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0576 Apr-Chr8 5169474 5174246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0576 104 195 Trihelix Transcription Factor Family AT3G14180 37.234 1.43e-15 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr8g0576 AA_kinase 1.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0576 - - gmx:100805459 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0576 8 5169474 5174246 Apr8g0576 8 5169474 5174246 ECH