Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0574 ATGGAATCCAATGGACTAGGTAGTGGAATGTTCTCTGGATTACTAGGAGGAGTAGAAAACCCTTTACAACAACAACAGCAAAACCTTCCCAATCAGCAAAATCCTCACCATTTGCACCATTCCCAAATGGTTTCTTATGCCACCCACCATGACACTGATCCACACACACATCTTCAGCAATCAATGAAACATGGGTACCCTCCCTTTTCAGCGAAGAACAAGCAACAACAAAGCGCCCTCAGTGATGAAGATGATCCTGTTGATGATTCCTCTGGGGACCCCAAGAGGAAGGTCTCACCATGGCAGAGAATGAAGTGGACTGATACCATGGTTAGACTCTTGATAATGGCGGTTTATTACATTGGTGATGAGGGTGGTTCAGATGTGAGTGATCCCACTGGGAAGAAGAAGTCCACTGGTTTGATGCAGAAGAAAGGGAAGTGGAAATCAGTGTCAAGGGCTATGATGGAAAAGGGATTCTATGTGTCTCCTCAGCAATGCGAGGATAAGTTCAATGACTTGAACAAGAGGTACAAGAGAGTGAATGATATTCTTGGCAAAGGAACATCTTGTAGGGTGGTGGAGAATCAGAACTTGTTGGATACAATGGACTTGGCACCAAAGATGAAAGATGAAGTTAAGAAGTTGCTCAATTCCAAGCATTTGTTCTTCAGGGAAATGTGCGCTTATCATAATAGTTGTGGTCATGGGAATCCCACTGTTCCACAACAGCAAGTGGAGCCTGGGACCGAGGTGTCTCAGTCTCAACCACAACAGCAACAGCAGCAACAACAACAACAACAGCAACAACGTTGTTTTCATTCATCAGAGAATGTGGTGGCAAATTTAGGTGGTTCTGGGGTAGAGGGTTTGAGGATGTTGAAAGCGGGAATTGGGGAAGAGGATGATGATGATGATGAAGATGATGACTCCGAGGACTATTCTGATGATGATGAAGATGACTCAGGAGAAGGTGGTTCAAAGGGTCAAGTTGGGCATGGACATGAAGATGAGGATGAGAATGAGAATGATGGAAGGTCAATAAGGAAGAAGTCAAGGAAAGTAGGCGGGTTTTCTATGTCACCACAGTTGATGCAGCAACTGAGTAGTGAGGTGAGCGGTGTGTTCCAAGATACGGGTAAGAGCACTTGGGAGAAAAAGCAATGGATGTGGAGCAAGATAATGCAGTTGGAGGAGCAGAAAATAAGCTATCAAACACAAGCATTTGAGCTTGAAAAGCAGCGGTTGAAATGGGCAAGGTTTAGCAGCAAAAAGGAGAGGGAAATGGAGAGAGCCAAACTTGAAAATGAACGCAGAACGCTTGAAAATGAGAGAATGGTTTTGCTCATTCGCCAAAAGGAGCTTGAATTGTTGAGTCTTCAACACCACCAGCAACAACAGCAGCAACAACAGCAGCAACATTCTTCCACCTAA 1434 0.4456 MESNGLGSGMFSGLLGGVENPLQQQQQNLPNQQNPHHLHHSQMVSYATHHDTDPHTHLQQSMKHGYPPFSAKNKQQQSALSDEDDPVDDSSGDPKRKVSPWQRMKWTDTMVRLLIMAVYYIGDEGGSDVSDPTGKKKSTGLMQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTSCRVVENQNLLDTMDLAPKMKDEVKKLLNSKHLFFREMCAYHNSCGHGNPTVPQQQVEPGTEVSQSQPQQQQQQQQQQQQQRCFHSSENVVANLGGSGVEGLRMLKAGIGEEDDDDDEDDDSEDYSDDDEDDSGEGGSKGQVGHGHEDEDENENDGRSIRKKSRKVGGFSMSPQLMQQLSSEVSGVFQDTGKSTWEKKQWMWSKIMQLEEQKISYQTQAFELEKQRLKWARFSSKKEREMERAKLENERRTLENERMVLLIRQKELELLSLQHHQQQQQQQQQQHSST* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0574 477 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 477 - -
Apr8g0574 477 Gene3D - 106 180 - -
Apr8g0574 477 Coils Coil 424 451 - -
Apr8g0574 477 MobiDBLite consensus disorder prediction 300 323 - -
Apr8g0574 477 Coils Coil 394 414 - -
Apr8g0574 477 MobiDBLite consensus disorder prediction 324 351 - -
Apr8g0574 477 MobiDBLite consensus disorder prediction 239 273 - -
Apr8g0574 477 MobiDBLite consensus disorder prediction 48 100 - -
Apr8g0574 477 Pfam Myb/SANT-like DNA-binding domain 103 229 IPR044822 -
Apr8g0574 477 MobiDBLite consensus disorder prediction 298 362 - -
Apr8g0574 477 PANTHER F16F4.11 PROTEIN-RELATED 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0574 Apr-Chr8 5142205 5144337 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr8g0574 Myb_DNA-bind_4 1.6e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0574 - - gmx:100816661 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0574 8 5142205 5144337 Apr8g0574 8 5142205 5144337 ECH
Apr4g0272 4 2279179 2280567 Apr8g0574 8 5142205 5144337 PCT