Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0570 ATGGGAGACAAACACCAAGACGACAGCAGCGATTTCACCTCCGAGGACGAAGGCACCGAGGATTACCGTCGCGGCGGTTACCACGCTGTACGAATCGGCGACACCTTCAACTCCGGTCTTTACGTCGTTCAGAGCAAGCTCGGTTGGGGCCATTTCTCCACCGTTTGGCTCGCTTGGGACACCAAACATTCTAGATACGTGGCTTTGAAGGTTCAAAAGAGTGCTCAGCATTACACTGAGGCTGCCATGGACGAGATAACGATTCTGCAACAGATTGCAGAGGGAGACCCTGATGATAAAAAGTGTGTGGTGAAGCTTTTGGATCATTTTAAGCATTCTGGTCCCAATGGACAGCATGTTTGTATGGTGTTTGAGTACCTTGGGGATAATCTTTTAACTCTTATTAAGTATTCTGACTATCGCGGAATGCCTATTAGTATGGTTAAAGAGATATGCTTTCATATTCTTGTTGGATTGGATTACTTGCATAAACAGCTTTCGATTATACATACTGATTTGAAACCCGAAAACATACTCCTTTTGTCCATGATAGATCCTTCTAAGGATCCTAGGAAGTCTGGTGCCCCTCTTATTCTTCCCAATAGTAGAGATAAGACAGCACTGGAGTCGGCGGCTGCGAAAGATTTGAAGACGTCGAATGGGGATTTGATTAAGAATCATAAGAAAAAGATTAAAAGAAAGGCTAAGCAAGCGGCTCATGGGTGTGTTGAGAAGGAAGCTTTTGAAGGACAGGGTAACAAACGAGGAAGCCGCTCGATGAGACAGAAGCTGCTGGCATCGGTTGATCTCAAGTGCAAGTTAGTTGACTTTGGTAATGCTTGCTGGACATATAAACAGTTTACAAGTGACATCCAGACAAGACAATATCGGTGCCCAGAGGTGATCCTTGGATCAAAGTATTCTACTTCTGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCTACTGGAGATGTGTTATTTGATCCTCACAGTGGTGACAACTTTGATAGGGATGAGGACCACTTAGCTTTAATGATGGAACTTCTTGGAATGATGCCACGCAAGATTGCACTAGGGGGTCGATATTCCCGTGATTTCTTTAATAGATATGGTGACTTGAGGCACATCCGTCGGTTGCGATTCTGGCCATTGAACAAAGTCCTCGTGGAGAAGTACGAGTTCAGTGAGAGAGATGCAAATGAAATGACAGACTTTTTGGTTCCTATCCTTGACTTTGTTCCTGAGAAGCGGCCAACAGCTGGTCAGTGCCTTCTACACCCATGGATCAATGCAGGTCCTCGCCTTTTGGAGCCATCTGTGCCTTCTAATCACAACCCCACCACTGAAACTGCTGTTTCTGACCAGAAGAAAAAGGACAAAGATGAGAGGGAAGCCATGGAGGCAGGAATGGGAAATATTGTTATCAATTCAGATTCTAAACCACTCATGCATTCTCCATCTAAGAAAGCCTTCCAAAGCATCCAGAAGTAG 1500 0.4487 MGDKHQDDSSDFTSEDEGTEDYRRGGYHAVRIGDTFNSGLYVVQSKLGWGHFSTVWLAWDTKHSRYVALKVQKSAQHYTEAAMDEITILQQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGMPISMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGAPLILPNSRDKTALESAAAKDLKTSNGDLIKNHKKKIKRKAKQAAHGCVEKEAFEGQGNKRGSRSMRQKLLASVDLKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLVEKYEFSERDANEMTDFLVPILDFVPEKRPTAGQCLLHPWINAGPRLLEPSVPSNHNPTTETAVSDQKKKDKDEREAMEAGMGNIVINSDSKPLMHSPSKKAFQSIQK* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0570 499 ProSiteProfiles Protein kinase domain profile. 41 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0570 499 CDD STKc_SRPK 30 432 - -
Apr8g0570 499 Pfam Protein kinase domain 41 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0570 499 Pfam Protein kinase domain 265 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0570 499 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 243 - -
Apr8g0570 499 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 262 495 - -
Apr8g0570 499 MobiDBLite consensus disorder prediction 1 20 - -
Apr8g0570 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Apr8g0570 499 ProSitePatterns Protein kinases ATP-binding region signature. 47 70 IPR017441 GO:0005524
Apr8g0570 499 Gene3D Transferase(Phosphotransferase) domain 1 95 432 - -
Apr8g0570 499 SUPERFAMILY Protein kinase-like (PK-like) 38 450 IPR011009 -
Apr8g0570 499 PANTHER SERINE KINASE-LIKE PROTEIN 9 243 - -
Apr8g0570 499 PANTHER SERINE KINASE-LIKE PROTEIN 262 495 - -
Apr8g0570 499 MobiDBLite consensus disorder prediction 454 470 - -
Apr8g0570 499 MobiDBLite consensus disorder prediction 439 499 - -
Apr8g0570 499 MobiDBLite consensus disorder prediction 481 499 - -
Apr8g0570 499 SMART serkin_6 41 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0570 499 Gene3D Phosphorylase Kinase; domain 1 27 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0570 Apr-Chr8 5087790 5100638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0570 8 483 EF-hand Containing Proteins AT5G22840 69.080 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Apr8g0570 Pkinase 3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0570 K08832 - gmx:100803070 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0570 8 5087790 5100638 Apr8g0570 8 5087790 5100638 ECH