Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0565 ATGGAATTCTCAGTGTTCCATTATCAGCACCATCCTATGATTCTTCATTGCCCTCTTACCTCCATTCTCTTGACAAGGACACAAAAAAGACTTACCGACAAAAGTTCATATAGGTTACCATGCAAATGCTCATATTCATCCACAAATAAAACTGCTACAGAAGCAGTTACAATGTCTTCACATATTGAAGGAAGGAGAGCATTGCTCAGTTGTCTCCTCACAACTGTTGCTGGAGTCTATACATGTGATGTGGCTGAAGCTGTTAGCACAAGTAGAAGAGCTCTACGAGGAGCCAAAATTCCTGAAAGTGATTTTACAACCTTACCCAATGGTCTGAAGTACTATGATTTGAAGGTTGGGGATGGAGCAGAGGCTGTAAAAGGCTCTCGTGTTGCAATTCACTATGTTGCTAAATGGAAGGGTATCACCTTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCTTATGGATTTGATGTGGGCCAATCTGAGAGGGGAACGGTCCTTAAAGGCTTGGATTTAGGAGTACAGGGCATGCGGGTTGGCGGCCAGCGACTGTTAATTGTTCCTCCTGAACTTGCCTATGGAAGCAAGGGTATCCAAGAAATCCCTCCGAATGCAACCATAGAGTTGGATATTGAGCTGCTCGCTATCAAACAAAGCCCATTTGGGACTGGCGTAAAGATTGTTGAGGGTTAA 708 0.4421 MEFSVFHYQHHPMILHCPLTSILLTRTQKRLTDKSSYRLPCKCSYSSTNKTATEAVTMSSHIEGRRALLSCLLTTVAGVYTCDVAEAVSTSRRALRGAKIPESDFTTLPNGLKYYDLKVGDGAEAVKGSRVAIHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGIQEIPPNATIELDIELLAIKQSPFGTGVKIVEG* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0565 235 Gene3D - 84 226 IPR046357 GO:0003755
Apr8g0565 235 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 20 235 - -
Apr8g0565 235 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 128 222 IPR001179 GO:0003755
Apr8g0565 235 SUPERFAMILY FKBP-like 95 222 - -
Apr8g0565 235 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 20 235 - -
Apr8g0565 235 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 124 219 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0565 Apr-Chr8 5035733 5040701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0565 117 221 Calmodulin-binding Proteins AT5G48570 30.909 2.68e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0565 - - gmx:100305843 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0565 8 5035733 5040701 Apr8g0565 8 5035733 5040701 ECH