Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0560 ATGGATACAATGTTGGTGCCTCCATGGCTTGAGCCACTCCTAAACGCACCCTTTTTCAATGTCTGTGGGATTCATGGGGATGCTGCAAGGAGCGAATGTAACATGTTTTGCCTCGACTGTAATGGGGATGCGTTTTGCTTCTATTGCCGTTCCTCAAGACACAAGGATCACCAAGTCATTCAGATAAGGCGATCTTCGTATCACGATGTAGTGAGGGTAGCGGAAATTCAGAAGGTGTTGGACATTAGTGGAGTGCAGACATATGTGATAAACAGTGCAAGAGTTCTGTTTCTGAATGAGAGGCCTCAGCCAAAGTCAGGGAAAGGAGTGGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGCTTCTGTTCTTTGGGATGTAAGCTTGTAGGAATAAAGAGAAATGGGGATGCAAGTTTTGCTTTGGATGCTAAAAATGAGGCATCGGCAATGGAGGGAATGTCAAGGAGATCAGTCTCTTCAAGGCATGAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGACATGTACCCGGCCACGCCTCCTCCACCTCCTTCAAACGCAAGGAGAAGAAAAGGCATTCCTCATAGGGCTCCTTTTGGCTCCTAA 624 0.4663 MDTMLVPPWLEPLLNAPFFNVCGIHGDAARSECNMFCLDCNGDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGIKRNGDASFALDAKNEASAMEGMSRRSVSSRHEEEELREGSQQDMYPATPPPPPSNARRRKGIPHRAPFGS* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0560 207 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 206 - -
Apr8g0560 207 MobiDBLite consensus disorder prediction 156 207 - -
Apr8g0560 207 SUPERFAMILY B-box zinc-binding domain 20 64 - -
Apr8g0560 207 Pfam PLATZ transcription factor 63 134 IPR006734 -
Apr8g0560 207 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 206 - -
Apr8g0560 207 MobiDBLite consensus disorder prediction 162 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0560 Apr-Chr8 4986317 4987990 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Apr8g0560 PLATZ 1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0560 - - gmx:100809455 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0255 4 2164903 2166341 Apr8g0560 8 4986317 4987990 PCT