Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0547 ATGGAAGTCGAAATCATCTCCACCCAACTCATCAAACCTTCTTGCCCAACACCAACACACCCAAAAACCCATAACCTCTCAATCATAGACCAGTTCATGCCTTCCATATACATACCAATGGTGCTTTTCTACCCTGCTGATCATATCATTCCATCCACTATTGATAGTAATATCACTCAGCAAAGATTGAAACAATTAAAGGAATCCTTATCACAAGTCTTGACTCAATTTTACCCATTCGCTGGAAGGATTAAAGACAAAATCACCATCGATTGCAATGATGAAGGGGTTTACTACACTGAGGCCAAAGTAAGTTGTAGTCTAGTTGAATTTTTCAACCATGCTAATTTCGCATCATTCACCCATAAACTTCTTCCAAACCAAACTATTTGGGACACAGCAACTGAAGGATACCCAACTATGATACAAGTGACTTGTTTTGCATGCGGTGGCATGGTGATAGGTACCTTGATATCGCATATGATAGCGGATGGAGCAGCTGCAAGTTTCTTTTTAAGTAGTTGGGGTTCTACATCTAAGAGTGAATTTCAACATGCATCTGCTCTTCCTAACTTTGACACTCCTTTTCTTAAGAATGTTGCATGCCCAAAAGATACAAATGTGATGGCTTTGTGTGGCCAATTTTTGAACATGGGTAAGCTTGCTATGAGGAGATTTTTGTTTGATGAAGAAGCTATGTCTAAGTTGAAGGCACAAGGGTCTAGTTTGACCGTGCAAAATCCTACTCGGGTGGAGGTTGTAACATCACTCCTATGCAAATGTTCTGCAAGAGCTTTCAGGGAAAACCATGGTTTGGAGAGGCCTAGTTTGTTAACTCATGCAGTAAACATGCGTCTAAGGGCATCTCCTAATTTTCCAAAATCATGTATGGGTAATTATGTTTGGCTGGCTTTGGCTTCGATGGGTGAAAAGGAGAAGGTAATTGAGTTACCTGAGTTGGTTATTAAATTGAGGGAAGCATTGAAATCAATCAACTCTGAATTTGTGAAAAGCTTAGAAGGTGAAGGAGGATTGATAAAATATTGTGAAGTTTCAAAGCAATTAATTGAGAGTGCTTCAAATGGTGCACAGACTAGTGGGGTGAATTATGTTCATTATACGAGTTGGTCCAATTTTGGTCTTTATGAGGTTGATTATGGATGGGGAAAGCCAATTTGGGTGTCATGCACTTCTGGTTCAGCTGAGGACAGCACTTTGTTTTTTAATTCGATCATCTTAATGGATACACCATCAAGTAAGGGAATAGAAGTTTGGATTTATTTGAATGAAGATGAAATGAGCATATTGCAACAAGACAAGGAGCTCCTTACCTTTGCAGCCTTAGATCCAAATCCTCTACAACTAAAGGATTATATATCTCGTGCTTGA 1389 0.3931 MEVEIISTQLIKPSCPTPTHPKTHNLSIIDQFMPSIYIPMVLFYPADHIIPSTIDSNITQQRLKQLKESLSQVLTQFYPFAGRIKDKITIDCNDEGVYYTEAKVSCSLVEFFNHANFASFTHKLLPNQTIWDTATEGYPTMIQVTCFACGGMVIGTLISHMIADGAAASFFLSSWGSTSKSEFQHASALPNFDTPFLKNVACPKDTNVMALCGQFLNMGKLAMRRFLFDEEAMSKLKAQGSSLTVQNPTRVEVVTSLLCKCSARAFRENHGLERPSLLTHAVNMRLRASPNFPKSCMGNYVWLALASMGEKEKVIELPELVIKLREALKSINSEFVKSLEGEGGLIKYCEVSKQLIESASNGAQTSGVNYVHYTSWSNFGLYEVDYGWGKPIWVSCTSGSAEDSTLFFNSIILMDTPSSKGIEVWIYLNEDEMSILQQDKELLTFAALDPNPLQLKDYISRA* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0547 462 PANTHER F21J9.9 2 454 - -
Apr8g0547 462 PANTHER VINORINE SYNTHASE-LIKE 2 454 - -
Apr8g0547 462 Gene3D - 219 446 IPR023213 -
Apr8g0547 462 Pfam Transferase family 1 442 - -
Apr8g0547 462 Gene3D - 1 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0547 Apr-Chr8 4851843 4853231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0547 1 438 Monolignol Biosynthesis Gene Families AT5G48930 23.529 1.74e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0547 - - aprc:113870852 934.48