Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0535 ATGAAGAGCTTCACCTACCATCTCCTCACTGGCCGTTGGTTCATGATCTTTGCCTCTTGTATAATCATGGCATTCTCAGGATCCTCCTACATGTTTGGTTTATACTCTAACGAAGTCAAAACCTCTTTGGGTTACGACCAATCAACTCTCAACTTAATAAGCTTCTTCAAAGACCTTGGTGTCAACATTGGAATTTTGCCAGGACTAATCAACGAGTTCAGCCCCCCTTGGGTTATACTAGCCATTGGTGCTGCCATTAACTTCATTGGTTACTTCATGATATGGCTCTCTGTCACTGCACGCATTGCTAAACCACAAGTTTGGCAAATGTGTCTCTACTTTTACATTGGTGCTAATTCACAATCTTTTTCCAATACTAGTACCCTTGTCAACTGTGTCAAAAGCTTCCCACGAAGTCGAGGTTATGTTATTGGCCTTCTCAAGGGTTATGTGGGTCTAAGTGGTGCTATTTTCACTCAGCTATACCATGCCTTCTATGGTGACAACTCCAAAGCTCTTATCTTCTTCATTGGTTGGCTTCCCACAGTCATTTCCTTCATTTTCCTTCCAACAGTTCGTGTGTTGAATATAGTGCCACAACTTAAAGAGATCAAAGTCTTTTACAAGCTTCTATATATTTCACTTGGGGTTGCTGGTTTTCTCATGGTTTTGATAGTCATACAAAACAAGTTGACTTTTACTAGTGTTGAGTATATAGTGGATAGCATGTTGGTTCTTTTCTTGCTTCTTCTCCCACTTGTCCTTGTATTTAAAGAAGAACTCAAAATCTGGGAGGCTGAAATCCAAGCCTCCATTGATGCAGATGATTCCCAATTGAAAGTAGTGACTCATGTTCCACCTTCAGTTATGAAACAGCCACAGCCAGAAACACAAGACGCACAAGGTTCCACAAGCCCTCAAAGGGAAATGTCTTGTGTAAGCAACATGTTCAAACGTCCAAATAGGGGTGAGGATTACAATATCTTCCAAGCTCTTTTCAGCATTGACATGTTGATTTTGTTCATTGTGACAACATGTGGTGTTGGTGGAACGTTGACGGTTCTTGACAACTTGGGACAGATTGGCAACTCATTGGGGTACTCCAAAAAAAGCCTTTCATCGTTTGTGTCACTTGTGAGTATATGGAACTATTTGGGAAGAGCAGCTTCTGGCTTTGCCTCTGAATTCTTTTTGACCAAATACAAGTTCCCTCGTCCCTTAATGCTCACACTTGTTATGCTTCTCTCTTGTGTTGGCCATCTTTTTATCGCCTTTGGTATCCCAAACTCTCTTTACTTTGCTTCAGTGATTACTGGGTTTTGCTTTGGGGCTATATGGCCTTTGAATTTTGCAATTGTGTCTGAATTATTTGGCCTCAAATACTACTCAACGTTGTTTAGTTTTGGGGCAGTGGCAAGCCCTCTTGGGACCTATATACTGAATGTGAAAGTGGCTGGTTATTTTTATGATAAAGAGGCACTGAAACAATTGGAGATGAAGGGACTCACAAGACAACATGGGAAGGAGTTAAGTTGCATAGGAGTAGATTGTTATAGGATGGCTTTTATCATAATCACCATAGCAACGTTGGTTGGTTGTTTCTTTTCTTTTATTTTGGTGTTAAGGACTAAAAAGTTTTACAAAGGTGATATTTATGAAAAATTCAGAGTAGAACAAGACCCACCAGGGACTCTTGCAACTGGCGCCAATTCCGACACCACAGATTGCAAGGAAGAACCTGATAAAATCAATGGAAACTGA 1761 0.4066 MKSFTYHLLTGRWFMIFASCIIMAFSGSSYMFGLYSNEVKTSLGYDQSTLNLISFFKDLGVNIGILPGLINEFSPPWVILAIGAAINFIGYFMIWLSVTARIAKPQVWQMCLYFYIGANSQSFSNTSTLVNCVKSFPRSRGYVIGLLKGYVGLSGAIFTQLYHAFYGDNSKALIFFIGWLPTVISFIFLPTVRVLNIVPQLKEIKVFYKLLYISLGVAGFLMVLIVIQNKLTFTSVEYIVDSMLVLFLLLLPLVLVFKEELKIWEAEIQASIDADDSQLKVVTHVPPSVMKQPQPETQDAQGSTSPQREMSCVSNMFKRPNRGEDYNIFQALFSIDMLILFIVTTCGVGGTLTVLDNLGQIGNSLGYSKKSLSSFVSLVSIWNYLGRAASGFASEFFLTKYKFPRPLMLTLVMLLSCVGHLFIAFGIPNSLYFASVITGFCFGAIWPLNFAIVSELFGLKYYSTLFSFGAVASPLGTYILNVKVAGYFYDKEALKQLEMKGLTRQHGKELSCIGVDCYRMAFIIITIATLVGCFFSFILVLRTKKFYKGDIYEKFRVEQDPPGTLATGANSDTTDCKEEPDKINGN* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0535 586 MobiDBLite consensus disorder prediction 288 307 - -
Apr8g0535 586 CDD MFS_Mch1p_like 11 533 - -
Apr8g0535 586 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 562 - -
Apr8g0535 586 SUPERFAMILY MFS general substrate transporter 234 546 IPR036259 -
Apr8g0535 586 Pfam Nodulin-like 12 256 IPR010658 -
Apr8g0535 586 MobiDBLite consensus disorder prediction 563 586 - -
Apr8g0535 586 MobiDBLite consensus disorder prediction 290 307 - -
Apr8g0535 586 Gene3D MFS general substrate transporter like domains 333 548 IPR036259 -
Apr8g0535 586 PANTHER MFS TRANSPORTER 1 562 - -
Apr8g0535 586 SUPERFAMILY MFS general substrate transporter 7 193 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0535 Apr-Chr8 4727151 4728911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0535 1 556 Nodulin-like Gene Family AT2G39210 60.963 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0535 - - gmx:100782396 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0535 8 4727151 4728911 Apr8g2592 8 35836782 35839079 ECH
Apr8g0535 8 4727151 4728911 Apr8g0535 8 4727151 4728911 ECH
Apr4g0227 4 1926916 1929171 Apr8g0535 8 4727151 4728911 PCT