Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0521 ATGTCTCAAGATTCTGAGGAGATAAAGACCATTGAGCAGTGGAGATGGTCTGAAATGCAAGGACTTGAGCTTGTGTCTTCTTCTGACTCACATAAATCCAACCCAACAACATTGGAAGAGGGAGAAGAACCAAAGGAAATGGAGGAGGAAGAGGTGGTTTCAGTGCCCAAGAAAGATAGTGGTGGTGTTTCTAATGGGGCTTCTAGTGGTGGCAGTGGTAGTGGGGAGAAGGGTGTGAGTGTTCCTTCTGTTGGGTTTATTGAGCTTTTCAGATTTGCTGATGGGTTGGATTACATTCTCATGGCAATTGGAACGGTTGGAGCAATAGTACATGGATGTTCCTTGCCACTGTTTCTTCGGTTCTTTGCTGATCTTGTGAATTCCTTCGGTTCCAATGCAAATAATTTGGATAAGATGACCCAGGAAGTGGTGAAGTATGCATTTTACTTCCTGGTCGTGGGTGCTGCCATATGGGCATCTTCATGGGCAGAGATTTCGTGTTGGATGTGGACAGGTGAGCGCCAATCAACGAGGATGAGGATCGGGTATCTTGAAGCAGCGTTGGACCAAGACATTCAATTCTTTGACACAGAGGTTCGAACATCCGATGTTGTTTTTGCCATTAACACTGATGCTGTCATGGTACAAGATGCAATTAGCGAGAAGTTGGGTAATTTCATTCACTACATGGCTACATTTGTTTCTGGGTTTGTTGTGGGTTTCACTGCTGTTTGGCAATTAGCACTGGTTACCCTTGCTGTAGTTCCTATGATAGCTGTAATTGGAGCCATTCACACCACAACTTTGGCCAAACTATCTAGCAAAAGCCAGGAAGCTCTTTCTGAAGCTGGCAACATTGTGGAACAGACTGTTGTCCAAATTCGAGTGGTGTTGGCATTTGTTGGGGAGACCAGGGCACTAGAGGCCTATTCCTCAGCATTGAGGATTGCCCAAAAGATTGGTTACAGAAGTGGATTTGCAAAGGGAATGGGATTGGGTGCCACTTACTTTGTTGTTTTCTGTTGCTATGCTCTTTTGCTTTGGTATGGAGGCTATCTGGTTAGGCACCAATACACCAATGGAGGGCTTGCCATTGCCACCATGTTTTCTGTTATGATTGGTGGATTGGCTTTAGGCCAGTCTGCACCCAGCATGGCTGCTTTTACAAAGGCAAGAGTTGCTGCTGCTAAAATTTTCCGTGTGATTGATCACAAACCGAGTATAGACAGAAAGACTGAAACAGGTTTGGAGTTAGAGACTGTGACAGGACTAGTAGAGCTGAAAAATGTGGACTTTGCATACCCCTCAAGGCCAGAGGTTCGGATCCTTAACAACTTCTCCTTGAATGTGCCTGCTGGCAAGACCATGGCTTTGGTGGGAAGCAGTGGCTCAGGCAAGAGCACAATTGTGTCCCTCATTGAGAGATTCTATGACCCTTCGTCAGGACAAGTGTTGCTTGATGGGCATGATGTTAAGACATTGAAGCTTAGGTGGTTGAGACAGCAGATAGGACTAGTGAGTCAAGAGCCTGCTTTATTTGCTACCACAATTGGAGAAAATATACTTTTAGGTAGGCCTGATGCAGCCAAGGTTGAGATAGAAGAAGCTGCCAGAGTAGCTAATGCTGATTCTTTTATCATCAAACTTCCCGAAGGTTATGAAACTCAGGTAGGAGAGAGAGGGCTGCAACTTTCAGGAGGACAAAAGCAGAGAATTGCAATTGCAAGGGCAATGCTGAAAAACCCAGCAATTCTTCTCCTAGATGAGGCAACAAGTGCATTGGACTCTGAGTCAGAAAAGTTGGTTCAAGAAGCCCTTGATAGGTTCATGATTGGTAGAACAACTCTTGTCATTGCTCATCGCCTCTCCACTATTCGCAAAGCTGACCTTGTTGCTGTGCTTGAGAAAGGAATTGTTTCTGAAATTGGAACTCATGATGAGCTCTTTGCCAAAGGTGAAAATGGAGTCTATGCCAAGCTTATCAAGATGCAGGAGATGGCACATGAAACTTCTATGAGTAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCTAGAAACTCTGTAAGCTCACCCATAATTGCTCGGAATTCTTCTTATGGCCGATCACCATACTCACGGAGACTGTCTGACTTCTCTACGTCTGATTTTAGTCTGACCGTTGATGCATCACATCCAAATTACAAGCATGAAAAGCTTGCTTTCAAAGATCAAGCCAGTTCCTTCTGGCGACTCGCAAAAATGAACTCTCCTGAATGGCTTTATGCTTTAATTGGTTCTATAGGATCTGTTGTTTGTGGATCCCTTAGTGCATTCTTTGCTTATGTTCTTAGCGCTGTCCTCAGTGTCTATTACAATCCAAATCACAGACACATGATTCGAGAAATTGAAAAATACTGCTACTTGTTGATTGGGCTTTCATCAACTGCACTTCTCTTCAATACATTGCAGCACTTCTTCTGGGATATTGTTGGTGAAAATCTCACAAAACGTGTAAGGGAGAAAATGTTGACTGCAGTGCTTAAAAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGGATTGCAGCAAGGCTATCTCTTGATGCCAACAATGTGAGATCAGCCATTGGAGATCGGATTTCAGTTATTGTGCAGAACACTGCACTTATGCTAGTTGCCTGCACTGCTGGGTTTGTATTGCAATGGCGCCTTGCCCTTGTTCTTGTGGCTGTCTTCCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGATCTGGAAGCTGCTCATGCCAAGGCCACACAACTAGCTGGAGAGGCTATAGCCAATGTAAGGACCGTTGCTGCCTTTAATTCAGAAAAGAAAATTGTTGGCCTTTTCACCTCCAATCTCGAAACTCCACTGCGGCGCTGCTTTTGGAAAGGACAAATTTCTGGAAGTGGATATGGGATAGCTCAGTTTGCACTCTATGCATCATATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCATGGTATATCTGATTTCTCTAAAACAATCCGAGTTTTTATGGTACTTATGGTTTCTGCCAATGGTGCTGCTGAAACCTTAACCCTGGCTCCTGACTTCATCAAGGGTGGTCGAGCAATGAGGTCAGTCTTTGATCTCCTTGACCGGAGAACTGAGATTGAGCCAGATGATCTAGATGCTACCCCTATCCCTGATCGGATTCGAGGTGAAGTAGAACTTAAGCACATTGACTTCTCTTATCCCACTAGACCAGATATGCCAGTTTTTCGTGACCTTTGTCTTCGAGCCAGGGCAGGTAAAACTCTTGCCCTTGTTGGGCCTAGTGGCTGTGGTAAGAGCTCAGTCATTGCACTTATACAAAGGTTCTATGATCCAACATCCGGCCGGGTCATGATTGATGGAAAGGACATAAGGAAATACAATCTCAAGTCCCTTAGAAGACACATTGCTGTGGTACCTCAGGAACCATGCCTGTTTGCTACTACTATTTATGAAAACATTGCATATGGGCATGACTCAGCTACTGAAGCTGAGATTAGAGAGGCTGCAACTCTTGCCAATGCTCACAAGTTCATATCTTCTCTGCCAGATGGATACAAGACATTTGTTGGCGAGAGAGGGGTTCAACTATCTGGAGGGCAAAAGCAAAGAATAGCAATTGCCAGAGCTTTTGCGAGGAAGGCAGAAGTTATGCTTCTTGATGAGGCAACAAGTGCACTTGATACTGAATCTGAGAGGTCTGTTCAGGAGGCCTTAGACCGTGCCTGCTCGGGAAAAACTACTATCATTGTTGCACACAGACTATCAACTATCAGGAATGCCAATCTCATTGCAGTTATTGATGATGGGAAAGTAGCAGAACAAGGCTCCCATTCACAGTTGTTGAAAAATCACTCTGATGGGATGTATGCACGCATGATTCAATTACAAAGGTTGACAAATAATGAAGCCATTGTTGGGATGCCCTCAGGTTCAAGTACTTCAGCAAGACCCAAAGATAATGAAAGAGAAGGCTAG 4044 0.4444 MSQDSEEIKTIEQWRWSEMQGLELVSSSDSHKSNPTTLEEGEEPKEMEEEEVVSVPKKDSGGVSNGASSGGSGSGEKGVSVPSVGFIELFRFADGLDYILMAIGTVGAIVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIGYLEAALDQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGAIHTTTLAKLSSKSQEALSEAGNIVEQTVVQIRVVLAFVGETRALEAYSSALRIAQKIGYRSGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHQYTNGGLAIATMFSVMIGGLALGQSAPSMAAFTKARVAAAKIFRVIDHKPSIDRKTETGLELETVTGLVELKNVDFAYPSRPEVRILNNFSLNVPAGKTMALVGSSGSGKSTIVSLIERFYDPSSGQVLLDGHDVKTLKLRWLRQQIGLVSQEPALFATTIGENILLGRPDAAKVEIEEAARVANADSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLEKGIVSEIGTHDELFAKGENGVYAKLIKMQEMAHETSMSNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLTVDASHPNYKHEKLAFKDQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPNHRHMIREIEKYCYLLIGLSSTALLFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLSLDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSEKKIVGLFTSNLETPLRRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIEPDDLDATPIPDRIRGEVELKHIDFSYPTRPDMPVFRDLCLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDSATEAEIREAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAIARAFARKAEVMLLDEATSALDTESERSVQEALDRACSGKTTIIVAHRLSTIRNANLIAVIDDGKVAEQGSHSQLLKNHSDGMYARMIQLQRLTNNEAIVGMPSGSSTSARPKDNEREG* 1348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0521 1347 MobiDBLite consensus disorder prediction 23 78 - -
Apr8g0521 1347 SUPERFAMILY ABC transporter transmembrane region 89 409 IPR036640 GO:0005524|GO:0016021
Apr8g0521 1347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 417 664 IPR027417 -
Apr8g0521 1347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1072 1319 IPR027417 -
Apr8g0521 1347 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 757 1044 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0521 1347 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 425 661 IPR003439 GO:0005524
Apr8g0521 1347 ProSitePatterns ABC transporters family signature. 564 578 IPR017871 GO:0005524
Apr8g0521 1347 MobiDBLite consensus disorder prediction 61 76 - -
Apr8g0521 1347 MobiDBLite consensus disorder prediction 1327 1347 - -
Apr8g0521 1347 CDD ABC_MTABC3_MDL1_MDL2 1080 1319 - -
Apr8g0521 1347 CDD ABC_6TM_Pgp_ABCB1_D2_like 746 1062 - -
Apr8g0521 1347 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 101 1323 IPR039421 -
Apr8g0521 1347 CDD ABC_MTABC3_MDL1_MDL2 425 664 - -
Apr8g0521 1347 SUPERFAMILY ABC transporter transmembrane region 744 1064 IPR036640 GO:0005524|GO:0016021
Apr8g0521 1347 SMART AAA_5 452 644 IPR003593 -
Apr8g0521 1347 SMART AAA_5 1107 1299 IPR003593 -
Apr8g0521 1347 Pfam ABC transporter transmembrane region 758 1027 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0521 1347 Pfam ABC transporter transmembrane region 101 374 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0521 1347 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1080 1316 IPR003439 GO:0005524
Apr8g0521 1347 Pfam ABC transporter 1101 1247 IPR003439 GO:0005524
Apr8g0521 1347 Pfam ABC transporter 443 592 IPR003439 GO:0005524
Apr8g0521 1347 Gene3D ABC transporter type 1, transmembrane domain 88 679 IPR036640 GO:0005524|GO:0016021
Apr8g0521 1347 Gene3D ABC transporter type 1, transmembrane domain 1046 1324 IPR036640 GO:0005524|GO:0016021
Apr8g0521 1347 Gene3D ABC transporter type 1, transmembrane domain 736 1045 IPR036640 GO:0005524|GO:0016021
Apr8g0521 1347 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 102 390 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0521 1347 ProSitePatterns ABC transporters family signature. 1219 1233 IPR017871 GO:0005524
Apr8g0521 1347 CDD ABC_6TM_Pgp_ABCB1_D1_like 101 398 - -
Apr8g0521 1347 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 101 1323 - -
Apr8g0521 1347 Gene3D - 415 665 IPR027417 -
Apr8g0521 1347 Gene3D - 1069 1320 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0521 Apr-Chr8 4595880 4602448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0521 77 1342 Calmodulin-binding Proteins AT2G36910 86.740 0.0 2266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0521 K05658 - gmx:100777382 2316.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0521 8 4595880 4602448 Apr8g0521 8 4595880 4602448 ECH