Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0515 ATGATTAGGGCTTTTGTAACGAGGATACAAAAGGGTTTCTCACTCTTTGTACAGAGAAGGCCAGCTCTCAGCTACTTGAGTGAAGATCATAGCACAACAAAGGTGCCAGATGATGTTATGGAAGGCTATTTTGCTGTTCTTGCTGTGAAGGGTGAGGAAACCAAAAGGTTTGTTGTTGGGTTAGATTACTTGAGTGATCCTGAATTCTTGGGCCTGCTGGATCAAGCCCGGGAAGAGTTCGGCTTCAGACAGAAGGGAACTCTTGCTATCCCTTGTCGGCCTCAAGAATTACAGAAGATTCTAAATGGTACCAAAGCATAG 321 0.4455 MIRAFVTRIQKGFSLFVQRRPALSYLSEDHSTTKVPDDVMEGYFAVLAVKGEETKRFVVGLDYLSDPEFLGLLDQAREEFGFRQKGTLAIPCRPQELQKILNGTKA* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0515 106 Pfam Auxin responsive protein 30 101 IPR003676 GO:0009733
Apr8g0515 106 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 105 - -
Apr8g0515 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0515 Apr-Chr8 4529077 4529397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0515 28 92 Calmodulin-binding Proteins AT5G20810 44.615 1.06e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0515 - K14488 gmx:100797479 166.007