Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0511 ATGCTTAGGTCTTTTGTGGGGAAAATACAAAAGGGTCTCTCACTAATTGTGCCACTGGAAACTGCAAATGTGGTGCCGAATGATGTTAGGAAAGGTTATTTTGCTGTTCTTGCAATCAAAGATGGAGAAACTAAAAGGTTTGTTGTAGACTTAGACTACTTGACTGATCCTGCATTCTTGGGACTCTTGGACCAAGCTCAAGAAGAATATGGTTTCAGACAGAAGGGAACTCTTGCAGTCCCTTGTCGGCCTCAGGAATTCCAGAAGATTCTAGATGGTTGGAGAACCTAG 291 0.4261 MLRSFVGKIQKGLSLIVPLETANVVPNDVRKGYFAVLAIKDGETKRFVVDLDYLTDPAFLGLLDQAQEEYGFRQKGTLAVPCRPQEFQKILDGWRT* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0511 96 Pfam Auxin responsive protein 24 91 IPR003676 GO:0009733
Apr8g0511 96 PANTHER SMALL AUXIN-UP RNA-RELATED 1 95 - -
Apr8g0511 96 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0511 Apr-Chr8 4494990 4495280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0511 26 91 Calmodulin-binding Proteins AT3G43120 40.909 9.44e-12 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0511 - K14488 ccaj:109813579 169.859