Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0509 ATGGATTTCCCTCGAAATGATGAAGGAAACGACGAGGTTGTTGAGGAATGCAATGTGGATGAGGAAATGGAAAGTTCAGATGAAGTCGATATGCAGAAGGATGGATACGTCAATTTGAGTGATTTATGTAGCACTGAGATTAAGAGAATGGAATTTTTAAGTGTTGAGGAATGTTATAAATTTTATAATAAATATGGCAAAATTAATGGGTTTAGTGTGAGGAAAAATAAAGGGGGTAAAAGTAAGAATGAAGATGTTGTGTGGCAGCAATTTGTTTGTTCAAGCCAAGGTTTTCGACGAGAAATTTACAGATGTAATCTCAATCGACTTTGGGAGCACAGAGCAATTACTAGGTTTGGCTGTGAGGCAGAGATGGAGATACGTTTCGATGTATATACAGGGTGCTGGGTAGTTTGTCGATTCTTTGATGATCATAATCATAATTTAGTTGATGAGAATTATTTTGGAATGTTAAGGTCACATCGCAAAATGGATGATGGTGATGTTGAACAGATGCATCGAATGAGGAAAAGTGGTATTCCGACCTGCAAAATATGA 558 0.3692 MDFPRNDEGNDEVVEECNVDEEMESSDEVDMQKDGYVNLSDLCSTEIKRMEFLSVEECYKFYNKYGKINGFSVRKNKGGKSKNEDVVWQQFVCSSQGFRREIYRCNLNRLWEHRAITRFGCEAEMEIRFDVYTGCWVVCRFFDDHNHNLVDENYFGMLRSHRKMDDGDVEQMHRMRKSGIPTCKI* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0509 185 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 12 174 - -
Apr8g0509 185 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 174 - -
Apr8g0509 185 Pfam FAR1 DNA-binding domain 60 150 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0509 Apr-Chr8 4460089 4460728 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Apr8g0509 FAR1 2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0509 - - aprc:113870816 364.385