Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0502 ATGGTAGAATTGGACTTAATTGGACTTGTGGGGTCAATTTCATTTTCAAATACCCAAATCAAAACCCTAAATTCTCAATCTCCAAACCCTAAAATGACCTCACAACTTGTTGTACACAATATTTCTCATTCTGAACCTTCCACCACCGAGTCACAACCCAAAGCCCAACTCGCCGCCGCAAAACCACCTTCCGCCGTCACACGCTCAACCAAGGACCGCCACACCAAAGTCAACGGACGCGGCCGCCGCGTCCGCATGCCGCCGCTCTGCGCCGCCCGCATTTTCCAGCTCACGCGCGAGCTCGGCCACCGATCCGACGGTGAAACCATCGAGTGGCTTCTCCGCCACGCTGAGCCCTCCATCATCGCTGCCACCGGCTCCGGCACCATCCCATCCGCTCCCGTATCCACCTTCGCCTCCTCCCTTTCCTCCTCGGCGCCCTCCGTCGCCTGCCGCGTCAATCCTGTGACGGCGGTGGACGGCGAAGGACAGGGGATGTTCGCGGTGGCTCCGCCGCAGCCGAGTTGCCGGCTTGACCTCTGCCAGCCGCAGGGAATGGAGTTCGCGGCGGCTAACGGGTACCGTCATATGCCGTTCACGGCGCTGTTGTTGCAGCCGACGACGGCGGAGGATAATCAACAAGAAGAGACTCTCAGCGAACAATGA 666 0.5916 MVELDLIGLVGSISFSNTQIKTLNSQSPNPKMTSQLVVHNISHSEPSTTESQPKAQLAAAKPPSAVTRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGSGTIPSAPVSTFASSLSSSAPSVACRVNPVTAVDGEGQGMFAVAPPQPSCRLDLCQPQGMEFAAANGYRHMPFTALLLQPTTAEDNQQEETLSEQ* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0502 221 Pfam TCP family transcription factor 69 150 IPR017887 -
Apr8g0502 221 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 24 152 - -
Apr8g0502 221 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 152 IPR005333 GO:0003700
Apr8g0502 221 MobiDBLite consensus disorder prediction 42 83 - -
Apr8g0502 221 ProSiteProfiles TCP domain profile. 70 124 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0502 Apr-Chr8 4411292 4413131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0502 70 208 TCP Transcription Factor Family AT2G37000 56.835 2.11e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr8g0502 TCP 9.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0502 - - aprc:113870815 409.838