Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0501 ATGGGTTTATATGAGCATTCAGATGTTCTTCAGTGGGGTATTAATCTTTTTGACAGTGACCCTGGTTATAGTCCAGGATACTACAGTGATGTAGTTCAACATGATAATAGTGATGTCTATAATGGACACTACTTCCCAAGCCATTACGATACTGAACGTCGCCAAATAGAGAATGATGAGATCATTGCACGGGCTCTACAAGAAGAATTTTCACGGCTAGATATTGCTGAGTGTTCAAGGTATTCACAGACAGATGATGAACGGTTCCATGCTTCTGAGCCTGCCTGGCATAACACATCAATGATGAACTATTATTCAGGAGGTCATGATTATGCCCAAGATAGAGTGGATGACGTTGAACCTTCTAGTTCATGTTGTAGTCCTTGTGAAGCAGAGGACTGCTTCTTGGAGCTTACTGACAATTATCCACTAGATGATGAAATTGGGAGGAGATTGAGTCAGATGATTCCAATTCCTCATGTTCCAAAAATTAATGGGGAAATTCCTTCAGTTGATGAAGCAACTTCAGATCATCAGAGGCTTCTGGATAGATTGCAGTTATATGACTTTGTGGAGCATATGGTTCAAGGAGATGGTAATTGTCAGTTCCGTGCGTTATCTGATCAATTGTATAACACACCTGATCACCACAAGTATGTGAGACGACAAGTTGTGAACCAGCTGAAGTCTCATCCAGAGATTTATGAGGGATATGTTCCCATGGAATATGGAGAATATTTGGAGAAGATGTCTAAGAGTGGTGAATGGGGTGATCACGTTACTCTTCAAGCAGCTGCAGATTCGTATGGTGTGAGAATATTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATTCTTCCTCATTTTGAGAAGCCAAGAGTGATTTTCCTGAGTTTTTGGGCAGAGGTGCATTACAACTCCATATATCCTCAAGGAGATATACCTTCAAGTGAGTCAAGAAAGAAGAAAAGGTGGTGGAACTTTGGAACTAAGCATTAA 1005 0.407 MGLYEHSDVLQWGINLFDSDPGYSPGYYSDVVQHDNSDVYNGHYFPSHYDTERRQIENDEIIARALQEEFSRLDIAECSRYSQTDDERFHASEPAWHNTSMMNYYSGGHDYAQDRVDDVEPSSSCCSPCEAEDCFLELTDNYPLDDEIGRRLSQMIPIPHVPKINGEIPSVDEATSDHQRLLDRLQLYDFVEHMVQGDGNCQFRALSDQLYNTPDHHKYVRRQVVNQLKSHPEIYEGYVPMEYGEYLEKMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFEKPRVIFLSFWAEVHYNSIYPQGDIPSSESRKKKRWWNFGTKH* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0501 334 ProSiteProfiles OTU domain profile. 190 313 IPR003323 -
Apr8g0501 334 PANTHER OTU DOMAIN CONTAINING PROTEIN 26 330 - -
Apr8g0501 334 SUPERFAMILY Cysteine proteinases 176 313 IPR038765 -
Apr8g0501 334 Coils Coil 49 69 - -
Apr8g0501 334 Gene3D - 171 317 - -
Apr8g0501 334 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 26 330 - -
Apr8g0501 334 Pfam OTU-like cysteine protease 196 282 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0501 Apr-Chr8 4403026 4409137 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0501 - - gmx:100811851 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0501 8 4403026 4409137 Apr8g1956 8 30177101 30184231 ECH
Apr8g0501 8 4403026 4409137 Apr8g0501 8 4403026 4409137 ECH