Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0500 ATGAAGTGTCTTCCATTCTACTATAGGGAGAAGAAACATGATCCTAAGAGTTTGCAATCAATTTCGGGACGGTCCAACAGTTCTAATTATGTGGAGGCTGAGATGAAAAGGTCTGGTTCTGAATTGAATTCTCTGGATGCCTCAGACAACAGCACAGACTCCCTCAGGAGAAATGCATTTCCCAGTTTGTCCCAGAGACCCAGCAACCTGAGAGTATTCACTGTTCCTGAACTAAAATCAGCCACTAAGAATTTTAGTCGCTCCGTTATGCTTGGAGAGGGTGGGTTCGGGTGTGTCTACAAAGGGTTGATCAAGAGTGTTGATGATCCTTCCACAAAAATTGAAGTTGCTGTTAAACAACTTGGTAAAAGAGGAATTCAGGGGCATAAGGAATGGGTAACAGAAGTGAATGTTCTGGGTATTGTGGAGCATCCTAATCTGGTGAAACTAGTGGGCTACTGTGCTGATGATGATGAAAGAGGAATTCAGCGGCTTTTGATTTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTATCTCCACGAACTGAAACTCCTCTCCCATGGGGTAGAAGGTTGAAAATAGCCCAAGATGCAGCTCGTGGGTTAACATACTTGCATGAGCAAATGGATTTTCAGATAATTTTCCGAGATTTTAAATCTTCAAATATCCTCCTCGACGAGCAGTGGAATGCAAAGTTGTCAGACTTTGGGTTAGCAAGATTGGGACCAGCTGATGGGTTAACTCATGTCTCAACAGCGGTTGTAGGAACAATGGGGTATGCAGCTCCAGAATATATTCAAACCGGGCGTCTCACAGCAAAGAGTGATGTATGGAGCTATGGCGTCTTCCTCTATGAACTCATTACTGGCAGGCGTCCTATAGATCGAAATCGCCCCAAGGGTGAGCAGAAGCTGTTGGAATGGGTAAGGCCATACCTTTCAGATGGGAAGAAGTTTCAAATAATATTGGATCCAAGACTTGAGAGGAAACAACTCTTCAAGTCAGCCCAAAAACTTGCTATAATAGCTAACAGATGCTTAGTCAGAAACCCAAAGAATCGCCCAAAGATGAGTGAAGTATTAGAAATGGTGAACCGGATTGTGGAGTCTTCGGTGGGTGCTAATCCACAGCCACCCTTAAAAAGTGTAGTAGCCTCAGCAGAAGCTTCTCAGGGCAATGAAATAAAGAACAAAAAAATGAACATGGATCCAAATCCAGATTGTAATTGGTTAAGAATGTGGAGGCCAAAGCTTTTAAGAGCATGTAGAATATTGTAG 1284 0.4299 MKCLPFYYREKKHDPKSLQSISGRSNSSNYVEAEMKRSGSELNSLDASDNSTDSLRRNAFPSLSQRPSNLRVFTVPELKSATKNFSRSVMLGEGGFGCVYKGLIKSVDDPSTKIEVAVKQLGKRGIQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRTETPLPWGRRLKIAQDAARGLTYLHEQMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPADGLTHVSTAVVGTMGYAAPEYIQTGRLTAKSDVWSYGVFLYELITGRRPIDRNRPKGEQKLLEWVRPYLSDGKKFQIILDPRLERKQLFKSAQKLAIIANRCLVRNPKNRPKMSEVLEMVNRIVESSVGANPQPPLKSVVASAEASQGNEIKNKKMNMDPNPDCNWLRMWRPKLLRACRIL* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0500 427 Gene3D Phosphorylase Kinase; domain 1 58 170 - -
Apr8g0500 427 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
Apr8g0500 427 Pfam Protein tyrosine and serine/threonine kinase 90 364 IPR001245 GO:0004672|GO:0006468
Apr8g0500 427 PANTHER OS01G0588500 PROTEIN-RELATED 12 409 - -
Apr8g0500 427 Gene3D Transferase(Phosphotransferase) domain 1 171 379 - -
Apr8g0500 427 SUPERFAMILY Protein kinase-like (PK-like) 61 366 IPR011009 -
Apr8g0500 427 MobiDBLite consensus disorder prediction 19 34 - -
Apr8g0500 427 CDD STKc_IRAK 91 369 - -
Apr8g0500 427 MobiDBLite consensus disorder prediction 11 60 - -
Apr8g0500 427 PANTHER KINASE 1B 12 409 - -
Apr8g0500 427 ProSiteProfiles Protein kinase domain profile. 85 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0500 427 MobiDBLite consensus disorder prediction 41 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0500 Apr-Chr8 4391374 4395492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0500 1 396 Glycoside Hydrolase AT3G07070 41.304 2.88e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr8g0500 PK_Tyr_Ser-Thr 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0500 - - gmx:100305438 765.763