Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g0500 | ATGAAGTGTCTTCCATTCTACTATAGGGAGAAGAAACATGATCCTAAGAGTTTGCAATCAATTTCGGGACGGTCCAACAGTTCTAATTATGTGGAGGCTGAGATGAAAAGGTCTGGTTCTGAATTGAATTCTCTGGATGCCTCAGACAACAGCACAGACTCCCTCAGGAGAAATGCATTTCCCAGTTTGTCCCAGAGACCCAGCAACCTGAGAGTATTCACTGTTCCTGAACTAAAATCAGCCACTAAGAATTTTAGTCGCTCCGTTATGCTTGGAGAGGGTGGGTTCGGGTGTGTCTACAAAGGGTTGATCAAGAGTGTTGATGATCCTTCCACAAAAATTGAAGTTGCTGTTAAACAACTTGGTAAAAGAGGAATTCAGGGGCATAAGGAATGGGTAACAGAAGTGAATGTTCTGGGTATTGTGGAGCATCCTAATCTGGTGAAACTAGTGGGCTACTGTGCTGATGATGATGAAAGAGGAATTCAGCGGCTTTTGATTTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTATCTCCACGAACTGAAACTCCTCTCCCATGGGGTAGAAGGTTGAAAATAGCCCAAGATGCAGCTCGTGGGTTAACATACTTGCATGAGCAAATGGATTTTCAGATAATTTTCCGAGATTTTAAATCTTCAAATATCCTCCTCGACGAGCAGTGGAATGCAAAGTTGTCAGACTTTGGGTTAGCAAGATTGGGACCAGCTGATGGGTTAACTCATGTCTCAACAGCGGTTGTAGGAACAATGGGGTATGCAGCTCCAGAATATATTCAAACCGGGCGTCTCACAGCAAAGAGTGATGTATGGAGCTATGGCGTCTTCCTCTATGAACTCATTACTGGCAGGCGTCCTATAGATCGAAATCGCCCCAAGGGTGAGCAGAAGCTGTTGGAATGGGTAAGGCCATACCTTTCAGATGGGAAGAAGTTTCAAATAATATTGGATCCAAGACTTGAGAGGAAACAACTCTTCAAGTCAGCCCAAAAACTTGCTATAATAGCTAACAGATGCTTAGTCAGAAACCCAAAGAATCGCCCAAAGATGAGTGAAGTATTAGAAATGGTGAACCGGATTGTGGAGTCTTCGGTGGGTGCTAATCCACAGCCACCCTTAAAAAGTGTAGTAGCCTCAGCAGAAGCTTCTCAGGGCAATGAAATAAAGAACAAAAAAATGAACATGGATCCAAATCCAGATTGTAATTGGTTAAGAATGTGGAGGCCAAAGCTTTTAAGAGCATGTAGAATATTGTAG | 1284 | 0.4299 | MKCLPFYYREKKHDPKSLQSISGRSNSSNYVEAEMKRSGSELNSLDASDNSTDSLRRNAFPSLSQRPSNLRVFTVPELKSATKNFSRSVMLGEGGFGCVYKGLIKSVDDPSTKIEVAVKQLGKRGIQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRTETPLPWGRRLKIAQDAARGLTYLHEQMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPADGLTHVSTAVVGTMGYAAPEYIQTGRLTAKSDVWSYGVFLYELITGRRPIDRNRPKGEQKLLEWVRPYLSDGKKFQIILDPRLERKQLFKSAQKLAIIANRCLVRNPKNRPKMSEVLEMVNRIVESSVGANPQPPLKSVVASAEASQGNEIKNKKMNMDPNPDCNWLRMWRPKLLRACRIL* | 428 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g0500 | 427 | Gene3D | Phosphorylase Kinase; domain 1 | 58 | 170 | - | - | |
Apr8g0500 | 427 | ProSitePatterns | Protein kinases ATP-binding region signature. | 91 | 119 | IPR017441 | GO:0005524 | |
Apr8g0500 | 427 | Pfam | Protein tyrosine and serine/threonine kinase | 90 | 364 | IPR001245 | GO:0004672|GO:0006468 | |
Apr8g0500 | 427 | PANTHER | OS01G0588500 PROTEIN-RELATED | 12 | 409 | - | - | |
Apr8g0500 | 427 | Gene3D | Transferase(Phosphotransferase) domain 1 | 171 | 379 | - | - | |
Apr8g0500 | 427 | SUPERFAMILY | Protein kinase-like (PK-like) | 61 | 366 | IPR011009 | - | |
Apr8g0500 | 427 | MobiDBLite | consensus disorder prediction | 19 | 34 | - | - | |
Apr8g0500 | 427 | CDD | STKc_IRAK | 91 | 369 | - | - | |
Apr8g0500 | 427 | MobiDBLite | consensus disorder prediction | 11 | 60 | - | - | |
Apr8g0500 | 427 | PANTHER | KINASE 1B | 12 | 409 | - | - | |
Apr8g0500 | 427 | ProSiteProfiles | Protein kinase domain profile. | 85 | 370 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g0500 | 427 | MobiDBLite | consensus disorder prediction | 41 | 60 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g0500 | Apr-Chr8 | 4391374 | 4395492 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g0500 | 1 | 396 | Glycoside Hydrolase | AT3G07070 | 41.304 | 2.88e-94 | 288 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Apr8g0500 | PK_Tyr_Ser-Thr | 3.3e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g0500 | - | - | gmx:100305438 | 765.763 |