Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0499 ATGAAGAACTGTGTTTCTTTGTTCCCTCTTCTTTTCTTGTCATTCTCTTTCCTATCACGGATTCAATGTGCCGATAACACTTTTGCCCCCTCCTTTTATTCTGAAGAAATCTATAAGGAGCTTGAAAATCTCGCTTCCCTTTTAAATAAGGACATTAAAACAAGTTTAGGCTTCTGCATCAAGGATGTGAACAAAGATTGGGAGGAAGCATTTGATTTTAAGGGAAGGCTAGATTTTGTGGATTCTTGTGTTAAGAAAAAAGGAGATTTCAGAGATAAAATATGCTCTGCGGCTGAAATAAGGTTCTACTTCCATGGCTTCTTGGATCCAGCGGCATCACCTAGCAATTACGTAAAACCTAACAAGAATTGCAATTTGACCTCATGGTTTTCCGGTTGTGAACCTGGTTGGAGTTGTAGTGCGGACAAGAGTATTGACTTGAAAAAGGACATAAAGGACATTCCTTTTAGAACTAGTAATTGCCAACCATGTTGTGAAGGGTTTTTCTGCCCTCAAGGATTGACTTGCATGATACCTTGCCCACTAGGTTCTTATTGTCCACTTGCAAAACTGAACAATGCGACTGGAGTATGTGACCCATATAGTTACCAAATACCTCAGGGAGATACAAATCATACTTGTGGCAGTGCTGATGTTTGGACTGGTGTGGTAAACAATAGTGATATCTTTTGTTCTCCAGGATCATATTGCCCAACTACAACACGCAAGGTTTCTTGTGATAGTGGATATTATTGCAGGATGGGTTCTACTCACGAAAATCCATGCTCCAAGTTGAGTACATGTAATCCAAATACGACAACCCAAAATATGCACGCTTACGGCGCTTTACTCATTGTTGCATTGAGTACTCTCTTGATCTTTATCTATAACTGCTCCGATCAAGTTCTAGCAACAAGAGAAAGAAGGAAGGCTAAATCTAGAGAAGCTGCTGCTAGACAAGTAAGAGAAACTGTACAAGCTCGAGAAAGGTGGAAAATAGCAAAAGATGTTGCTAAGAGAGGTAAGGTGGGATTGCAAGAGCAATTTTCTCGCACCTTTTCTCGAAGAAAATCAATGAAGCAAACAGATCAATCAAAGGGGTTTGGCCAAGGAAAATCTGCTACAGGTGACACATTTGGTGATTCTTCAAGCACATCTGAGCAATCATCTACAACACAAAAAGAACCTACTAACCTGACTAAAATGTTGAATTCCCTTGAAAATGACCCACATAGCAATGAAGGATTCAATCTACAAATTGGAGATAAAAATATAAAAAAGCAAATGCCAAAAGGCAAACAATTACATACACAAAGCCAAATTTTAAGATATGCTTATGGTCAAATTGCGAAGGAGAAAGCTCAGCAAGAAAAAAACAAGAACTTAACTTTCTCAGGAGTAATTTCAATGGCTACTGAAGGTGAGGTTCGAACAAGGCCTGTGATTGAGGTAGCTTTCAAAGATTTAACTCTCACTTTGAAAGGGAAAAGAAAACATCTAATGAGGTGTGTGAGTGGTAAACTCATGCCAGGTCGAGTTTCAGCTGTGATGGGTCCCTCAGGAGCTGGTAAAACTACATTTCTTTCTGCTTTAGCTGGGAAAGCAAGAGGATGCACCATGACAGGGTCAATTTTAATCAATGGAAAACCCGAATCTATTCATTGTTATCAAAAAATTATTGGTTTTGTGCCACAAGATGATATTGTGCATGGAAACTTGACTGTGGAGGAAAATCTTCGTTTCAGTGCAAGATGCAGACTATCTGCGGATATGCCAAAACCAGATAAGGTTCTGATTGTTGAAAGAGTAATTGAGTCCTTGGGACTCCAAGCAGTGAGGGATTCCCTTGTTGGGACAGTAGAAAAGCGAGGTATATCTGGAGGACAACGAAAGCGTGTTAATGTAGGGATGGAGATGGTTATGGAACCTTCATTATTAATCTTAGATGAGCCTACAACTGGTCTAGACAGTGCATCTTCCACTTTACTACTTAAAGCACTTCGTCGTGAAGCACTTGAAGGGGTAAATATTTGCATGGTACTTCACCAACCAAGCTATACTTTGTTCAGAATGTTTGATGATATAATATTTCTAGCCAAAGGTGGCCTTACTGCATATCATGGTCCTGTTAAAAAAGTTGAAGAATACTTTGCTAGCATTGGAATTAATGTACCTGACCGTGTGAATCCTCCAGACCATTTCATTGACATTCTAGAAGGTTTAGTGAAACCAAGTGGAGGTGTGACCCATCAACAACTTCCTATTAGATGGATGCTTCATAATGGTTACCCAATTCCACCTGATATGCTTCATTTTGCTGATCAAATTGCTGCTTCATCATCTTCCTCAAATGCAAATGATGCAACAAAGGCCACAGAGCATGATGCTGTTGATCAATCCTTTGCTGGTGAGTTTTGGGAGGATATGAAGAGTAATGTTCAGATTCGACGAGATCATATAGAGGCAACCTTCTTAAGGACTAAGGACTTATCTAATCGAAGAACTCCAGGTGTAGCTCGACAATATAGATACTACGTTGGACGGATTTGTAAGCAACAACTGCGAGAAGCAAAATCACAAGCAGTTGATTATCTCCTTTTATTAGTTGCTGGGGCAATATTAGGAACGCTTACGAAAGTAAATGATGAAACATTTGGATCCCTTGGATATACATACACTGTCATTGCTGTCTCTCTACTTAGCAAGATTGCAGCTCTTAGATCGTTTTCTTTGGATAAATTACAATACTGGAGGGAGAGTGCATCTGGGATCAGCAATCTAGCTCATTTTTTGGCCAAAGATACAATTGATCTATTCAATACAATCATTAAACCTGTAGTATATCTGTCCATGTTCTATTTTTTTAGCAACCCAAGGTCAAGCTTTGCAAGCAATTATGCGGTTTTGCTCTGCCTTGTGTATTGTGTAACTGGCATGGCTTATGCGATAGCAATTTATTTTGAGCCTGCTCCAGCACAGTTGTGGTCAGTGCTTCTCCCTGTTGTCATGACTCTAATTGCCAACCAAACAAGAGATACTCTTTTTATGAAGATCCTTGTCAAGTTGTGCTACCCAAATTGGGCTTTGGAGGCCTTTATCATTGCAAATGCTGAAAGGTATACTGGAGTATGGCTAATAACACGTTGTAGTTCACTTATGAATAGTGGCTATAACGTCAATGATTGGTCTATTTGTTTAGTTGCTCTTATTATTTACGGTATACTTGCTCGAGTTGTGGCCTTCGTTTGTCTGGTGATGACTCAAAAGAAATGA 3273 0.3951 MKNCVSLFPLLFLSFSFLSRIQCADNTFAPSFYSEEIYKELENLASLLNKDIKTSLGFCIKDVNKDWEEAFDFKGRLDFVDSCVKKKGDFRDKICSAAEIRFYFHGFLDPAASPSNYVKPNKNCNLTSWFSGCEPGWSCSADKSIDLKKDIKDIPFRTSNCQPCCEGFFCPQGLTCMIPCPLGSYCPLAKLNNATGVCDPYSYQIPQGDTNHTCGSADVWTGVVNNSDIFCSPGSYCPTTTRKVSCDSGYYCRMGSTHENPCSKLSTCNPNTTTQNMHAYGALLIVALSTLLIFIYNCSDQVLATRERRKAKSREAAARQVRETVQARERWKIAKDVAKRGKVGLQEQFSRTFSRRKSMKQTDQSKGFGQGKSATGDTFGDSSSTSEQSSTTQKEPTNLTKMLNSLENDPHSNEGFNLQIGDKNIKKQMPKGKQLHTQSQILRYAYGQIAKEKAQQEKNKNLTFSGVISMATEGEVRTRPVIEVAFKDLTLTLKGKRKHLMRCVSGKLMPGRVSAVMGPSGAGKTTFLSALAGKARGCTMTGSILINGKPESIHCYQKIIGFVPQDDIVHGNLTVEENLRFSARCRLSADMPKPDKVLIVERVIESLGLQAVRDSLVGTVEKRGISGGQRKRVNVGMEMVMEPSLLILDEPTTGLDSASSTLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFASIGINVPDRVNPPDHFIDILEGLVKPSGGVTHQQLPIRWMLHNGYPIPPDMLHFADQIAASSSSSNANDATKATEHDAVDQSFAGEFWEDMKSNVQIRRDHIEATFLRTKDLSNRRTPGVARQYRYYVGRICKQQLREAKSQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLSKIAALRSFSLDKLQYWRESASGISNLAHFLAKDTIDLFNTIIKPVVYLSMFYFFSNPRSSFASNYAVLLCLVYCVTGMAYAIAIYFEPAPAQLWSVLLPVVMTLIANQTRDTLFMKILVKLCYPNWALEAFIIANAERYTGVWLITRCSSLMNSGYNVNDWSICLVALIIYGILARVVAFVCLVMTQKK* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0499 1090 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 27 1086 - -
Apr8g0499 1090 Coils Coil 1084 1090 - -
Apr8g0499 1090 ProSitePatterns ABC transporters family signature. 625 639 IPR017871 GO:0005524
Apr8g0499 1090 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 484 725 IPR003439 GO:0005524
Apr8g0499 1090 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 27 1086 - -
Apr8g0499 1090 MobiDBLite consensus disorder prediction 348 397 - -
Apr8g0499 1090 Pfam ABC transporter 504 652 IPR003439 GO:0005524
Apr8g0499 1090 MobiDBLite consensus disorder prediction 363 397 - -
Apr8g0499 1090 Gene3D - 474 723 IPR027417 -
Apr8g0499 1090 CDD ABCG_EPDR 482 708 - -
Apr8g0499 1090 Pfam ABC-2 type transporter 682 1090 IPR043926 GO:0140359
Apr8g0499 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 484 707 IPR027417 -
Apr8g0499 1090 SMART AAA_5 510 702 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0499 Apr-Chr8 4379729 4389029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0499 511 704 Calmodulin-binding Proteins AT2G36910 28.218 1.01e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0499 - - gmx:100780238 1944.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0499 8 4379729 4389029 Apr8g1957 8 30186461 30193519 ECH
Apr8g0499 8 4379729 4389029 Apr8g0499 8 4379729 4389029 ECH