Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0498 ATGGATCGGGAGGAATATTTACGGAAGTGTTCCAATATGAAATGCCAAAGAGTTCAGATGGATGAATCATCCGTACCTTCTCTGCAAGATGAAGTAATGGAGGTTGAGCGTTTGCTTGCAGAACCTAGAAATGATCATGTTTCAGTGGATAGTAGTTTGGATTCACACACAACTTTGAATAGCAAAGATGATTTGGAACTGGAGGTCCTTGATGGATTGCTAGATGATGTTGAAATTGATGATCTTGAAGGGACCGATGGTTTCTCTGGTGCATGTGAAGAGTATTTTTTGGATTTTGATTTTGCTAACAAAGCTGAGGTTCTAGGCTCTGGTCCATCTGAAGTTTCACTTTTGCAAAACTCAAGTTCGGAAAGCCATTCTTCTGGATTAAGTGGAAGTAGCATTATTGGTGGGGTATTACAATCAACAAAAGTACCCAATGCACAATCTGAATGCAAAATTGATTCTTTAGATGAGGCAGCAACCAATGAATCACATGGTGCATTCAGGAACAATCTAAGTCAACCATCAAATGTAAATTGCATGTACAACATTTCACTCGATTTACAGCATCTGCATGAGTTGGATAACAATCATCATTTTGTCGGTGGTATATTGTCTTGTGAGAAGGAAAAGGGTCCTGTTGTAAAAAGCCAACCTGCTGCACATAGAGAGAAGAGATCCCGAAAGCCTACTCAGAGGTATATTGAAGAGTTCTCAAATTTGAGGTCAAAGGAAAAGGGACCAGCTACTGGTACAAAAACTAAACATTTAAGTGACCCATCATGTAATGAACTTCGTATAAGAATTAAAGCATTGAAAAAGATTCCAGGCGAGAAGTCTAGCAATGAAAATAATGACGTGATGTTTCCTGAGTTGCAAGTTCGCAAAGGACGTCCAAAGATAGAGAAACTTGAGTATGACGATGAGCCATCTCCCTCAGAATCTGAGGATGGAAGTTTGACGTCCAAAAAAGCTAGAAGGAAAGATCGAAGAAAGCATCAGAGGATGTGGACTCTCTCTGAAGTCATGAAGTTGGTTGAAGGCGTATCTGAATATGGAGTTGGTCGATGGACTGATATAAAGAGGTTTTTGTTTTCTTCTTCAAGCTACCGAACTCCTATAGATCTCAGGGACAAGTGGCGAAACCTTTTACGAGCCAGTACTGTGCAGAAATTCAACAAGAAAGAGGCCGAGCAAAATGATGAGCATGCCCTCCGTCCCTTGCCATTTATCGTGGTACGCCGAGTGCGCGAATTGGCTAAAATTCATCCATACCCAAGGCAACGTGGCTCAAAGAAATCACGTGTTAGCCCAATAGGTTCTTCTGCCATTGCTAAAGATTCTCCTCCAGTTAGTCTTAGCAAAAGAAATGTAAGTAGGAAAAAGTGTACCTAG 1398 0.4084 MDREEYLRKCSNMKCQRVQMDESSVPSLQDEVMEVERLLAEPRNDHVSVDSSLDSHTTLNSKDDLELEVLDGLLDDVEIDDLEGTDGFSGACEEYFLDFDFANKAEVLGSGPSEVSLLQNSSSESHSSGLSGSSIIGGVLQSTKVPNAQSECKIDSLDEAATNESHGAFRNNLSQPSNVNCMYNISLDLQHLHELDNNHHFVGGILSCEKEKGPVVKSQPAAHREKRSRKPTQRYIEEFSNLRSKEKGPATGTKTKHLSDPSCNELRIRIKALKKIPGEKSSNENNDVMFPELQVRKGRPKIEKLEYDDEPSPSESEDGSLTSKKARRKDRRKHQRMWTLSEVMKLVEGVSEYGVGRWTDIKRFLFSSSSYRTPIDLRDKWRNLLRASTVQKFNKKEAEQNDEHALRPLPFIVVRRVRELAKIHPYPRQRGSKKSRVSPIGSSAIAKDSPPVSLSKRNVSRKKCT* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0498 465 MobiDBLite consensus disorder prediction 214 260 - -
Apr8g0498 465 ProSiteProfiles Myb-like domain profile. 330 385 IPR001005 -
Apr8g0498 465 PANTHER TRF-LIKE 8 8 463 - -
Apr8g0498 465 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 8 463 - -
Apr8g0498 465 SMART sant 334 387 IPR001005 -
Apr8g0498 465 MobiDBLite consensus disorder prediction 216 253 - -
Apr8g0498 465 MobiDBLite consensus disorder prediction 274 334 - -
Apr8g0498 465 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 330 389 IPR017930 -
Apr8g0498 465 Gene3D - 323 437 - -
Apr8g0498 465 SUPERFAMILY Homeodomain-like 332 405 IPR009057 -
Apr8g0498 465 CDD SANT_TRF 336 386 - -
Apr8g0498 465 Pfam Myb-like DNA-binding domain 338 385 IPR001005 -
Apr8g0498 465 MobiDBLite consensus disorder prediction 424 465 - -
Apr8g0498 465 MobiDBLite consensus disorder prediction 294 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0498 Apr-Chr8 4368488 4375134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0498 338 391 Single Myb Histone (SMH) Gene Family AT1G17520 44.643 1.97e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr8g0498 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0498 - - aprc:113871152 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0498 8 4368488 4375134 Apr8g0498 8 4368488 4375134 ECH