Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0494 ATGGACGGAGCCAATGGCAGCGTTGCAAACCATGACGCCGCTTTTTGCTTGAATACTAACAATAATGTCAGTGCTGACCCTCTCAACTGGGGTGTGGCTGCTGAGTCCATGGCCGGGAGCCACTTGGACGAGGTCAAACGTATGGTGGCTGAGTACCGGAAACCGGTTGTCCGCCTCGGCGGAGAGACGCTCACGATTTCTCAGGTGGCTGCTATCGCCGCACATGACCAAGGGGTTCGTGTCGAGCTCTCTGAGTCTGCTAGGGAAGGGGTTAAGGCCAGCAGCGACTGGGTCATCAACAGCATGAACAATGGCACTGATAGCTACGGTGTCACCACCGGGTTCGGTGCTACCTCCCACCGACGAACCAAACAAGGTGGCGCCTTGCAGAAGGAGCTTATTAGGTTTTTGAATGCTGGAATATTTGGCAACGGTACAGAGTCCAATTGTACCTTACCACACACAGCAACTAGAGCAGCTATGCTAGTAAGAATCAACACTCTTCTTCAAGGGTACTCAGGCATTAGATTTGAGATTTTAGAGGCCATAACCAAGCTATTGAACAACAATATTACCCCCTGTCTGCCACTTAGGGGTACAATTACAGCATCTGGTGATCTTGTTCCTCTTTCTTACATTGCTGGTTTGTTAACTGGTCGACCCAACTCCAAGGCTGTTGGACCTTCTGGAGAGATTCTGAATGCTAAGGAAGCTTTTCAATTGGCAAACATTGGTTCAGAGTTCTTTGAATTGCAACCTAAGGAAGGGCTTGCCCTTGTCAATGGCACTGCTGTTGGTTCTGGCTTAGCTTCTATTGTTCTCTTTGAGGCAAATGTCTTAGCTGTTTTGTCTGAAGTTTTGTCAGCAATTTTTGCTGAAGTGATGCAAGGGAAGCCTGAGTTCACTGACCATTTGACCCATAAGCTAAAGCACCACCCTGGTCAAATTGAGGCTGCTGCTATTATGGAACACATTTTGGATGGAAGCTCTTATATTAAAGCGGCTAAGAAATTGCATGAGATTGATCCTCTGCAAAAGCCTAAACAAGATCGTTATGCATTAAGAACTTCACCCCAATGGCTTGGTCCTCAAATTGAAGTGATTAGATTTTCAACTAAGTCAATTGAGAGAGAGATAAACTCAGTCAATGACAACCCTTTGATTGATGTTTCAAGGAACAAGGCTTTGCATGGTGGTAACTTTCAAGGCACTCCCATTGGAGTCTCAATGGATAATACACGTTTGGCTATTGCATCAATTGGCAAGCTCATGTTTGCTCAATTCTCTGAGCTTGTCAATGATTTTTACAATAATGGGTTACCTTCAAATCTCTCTGCTAGTAGAAATCCCAGCTTGGATTATGGTTTCAAGGGATCTGAAATTGCTATGGCATCTTATTGCTCTGAACTCCAATATTTGGCCAACCCAGTAACAAGCCACGTCCAAAGTGCTGAGCAGCACAACCAAGATGTGAACTCTTTGGGTTTGATTTCATCTAGGAAAACCCATGAGGCTATTGAGATCTTGAAGCTCATGTCTTCCACTTTCTTGATTGCACTTTGCCAAGCAATTGACTTGAGGCATTTGGAGGAGAATTTGAAGAACACTGTGAAGAATGTTGTGAGTCAAGTTGCCAAGAGGACTCTTACCACAGGTGTCAATGGAGAACTTCATCCTTCAAGATTTTGTGAGAAAGATTTGCTGAAAATTGTTGATAGGGAGTATATATTTGCATACATTGACGACCCATGCAGTGCTACATACCCATTGATGCAAAAACTAAGGCAAGTGCTTGTGGATCATGCATTAGCAAATGCAGAGGGAGAGAAGAACTTGAACACATCAATCTTCCAAAAGATTGCAACATTTGAGGATGAGTTGAAGGCCCTCTTGCCAAAGGAGGTTGAAGGTTTAAGAGTTGCATATGAGAATGGCCAATGTGCAATTCCTAACAAGATTAAGGAATGTAGGTCTTACCCATTGTACAAGTTTGTGAGAGAGGAGTTGGGGACAGCATTGCTAACTGGTGAAAAGGTTATTTCACCAGGTGAGGAGTGTGATAAATTGTTCACAGCAATGTGCCAAGGTAAAATTATCGATCCTATTTTGGAGTGCCTTGGGGAGTGGAATGGTGCTCCTCTTCCAATTTGTTAG 2154 0.4424 MDGANGSVANHDAAFCLNTNNNVSADPLNWGVAAESMAGSHLDEVKRMVAEYRKPVVRLGGETLTISQVAAIAAHDQGVRVELSESAREGVKASSDWVINSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEILNAKEAFQLANIGSEFFELQPKEGLALVNGTAVGSGLASIVLFEANVLAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGSEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTHEAIEILKLMSSTFLIALCQAIDLRHLEENLKNTVKNVVSQVAKRTLTTGVNGELHPSRFCEKDLLKIVDREYIFAYIDDPCSATYPLMQKLRQVLVDHALANAEGEKNLNTSIFQKIATFEDELKALLPKEVEGLRVAYENGQCAIPNKIKECRSYPLYKFVREELGTALLTGEKVISPGEECDKLFTAMCQGKIIDPILECLGEWNGAPLPIC* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0494 717 CDD PAL-HAL 62 527 IPR001106 -
Apr8g0494 717 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 19 717 - -
Apr8g0494 717 Gene3D - 530 651 IPR023144 -
Apr8g0494 717 PANTHER HISTIDINE AMMONIA-LYASE 19 717 IPR001106 -
Apr8g0494 717 SUPERFAMILY L-aspartase-like 26 717 IPR008948 GO:0003824
Apr8g0494 717 Pfam Aromatic amino acid lyase 64 544 IPR001106 -
Apr8g0494 717 Gene3D Fumarase/aspartase (Central domain) 264 712 - -
Apr8g0494 717 Gene3D - 17 263 IPR024083 -
Apr8g0494 717 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 26 706 IPR005922 GO:0005737|GO:0006559|GO:0016841
Apr8g0494 717 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 199 215 IPR022313 GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0494 Apr-Chr8 4335829 4340169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0494 12 717 Monolignol Biosynthesis Gene Families AT2G37040 82.841 0.0 1239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0494 K10775 - gmx:100803857 1320.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0494 8 4335829 4340169 Apr8g1964 8 30245962 30255874 ECH
Apr8g0494 8 4335829 4340169 Apr8g0494 8 4335829 4340169 ECH