Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0491 ATGGAAGAAGCAGATGAAGGAAGTTTTGGTGGCTCTACAAGAACCTCATTTCGTGATGAATTGGACACAAATAAGTTAATGGAAAACAAAGAGAGTCACTTGTCAATGCTGGCTTATGAGATGAGTGGCAAACAGAAGTTTGAGAAGGATGCAATAGGGAGGTCCTTAGATGGAAGAGAACTTTCCAGGGTCTTTTCTGAGGATTATGATGCCGCACAAATGTTGATATTGGATCCTAGGGGAACTAGAGTAAATAAATGGAACAAAATATTCTTAGCAGCTTGTTTGATTTCACTATTTGTGGATCCCTTATTCTTTTACTTACCAGTGGCTAAGAAAGACAAGTGCATTGATATGTCAACTGGTCTTGAAGTGTCCCTTACCATAATTCGGTCACTGGTTGATGCATTTTACATTATTCAGATTTATTTTCGGTTTCAAACCGCTTATATTGCTCCTTCCTCTCGTGTTTCTGGTAGAGGAGAGCTTATTATAGACTCTTCTAAGATTGCATCAAAGTACCTGCAGAAAGACTTCTGGCTTGATCTTGTGGCTGCTCAACCACTTCCACAGGTTTTAGGTTCCTCTTGGTATCTTTTATCAATTGAAAGGCAGAATGAATGTTGGAAGAAAGCTTGTACATTGCAGTACCCATACTGCCAGTATCATTATCTTGAGTGTCAAAGCATAGGTGACCCAAATAGAATTGCTTGGTTAAGATCAAGTAATCTATCAGACCTATGTGATCAGAACAGTGATTTCTTTCATTTTGGCATTTTTGCGGATGCTCTAACTTTGGAAATTACGGGCTCCAAATTCTTCAACAAATACTGTTACTGTCTTTGGTGGGGACTAAGGAATCTAAGCTCTGTAGGACAGAATCTCTTAACAAGCACACGGGTTGCAGAGATAAATTTTGCTGTGATTGTTGCAATTCTTGGATTGGTGCTCTTTGCATTGCTTATAGGAAATATGCAAACCTACCTGCAATCCACCACTACACGGCTAGAAGAATGGAGAATAAGAAGGACAGATACGGAAAGATGGATGCATCACAGGCAGCTCCCTCATTACCTAAAGCAAAATGTGCGCCGTCACGACCAATTCAGATGGGTTGCCACTCGAGGAGTTGATGAGGAAACTATTCTCCGAGACCTTCCTGTGGACCTCAGACGCGACATCAAACGCCACCTTTGCCTTAATCTAGTCCGACAAGTACCACTATTTGATCAAATGGATGAGAGGATGCTAGATGCAATATGTGAGAGGCTGAAGCCTTCTCTTTTCACTCCAGGAACTTGTGTAGTTCGTGAAGGTGACCTTGTGAATGAGATGCTCTTCATTGTTCGAGGACGCCTAGATTCTTGCACCACCAATGGTGGCAGAACAGGTTTCTTCAACACCTGCAGAATTGGCTCTGGTGACTTCTGTGGAGAAGAGCTATTGCCATGGGCCTTGGACCCTCGTCCAACCGTCGTCCTTCCTTCTTCGACTCGAACCGTGAAAGCCATCACTGAAGTGGAGGCTTTTGCACTCATTGCTGAGGACTTGAAGTTTGTGGCAGCCCAATTCCGCAGGTTGCATAGCAAGCAACTGAGGCACACATTTAGGTTCCACTCTCATCAGTGGAGGACTTGGGCTGCATGCTTTATACAAGCAGCGTGGTTTAGGTATAAGAGAATGAAAGAGACTAGTGATCTTAAGAAAAAGGAGAATGTGATGATGTCCTATGTGCCTGGAACTGGCACTGAACATTTCTCTGCACCACTGCAGCCCCTAATGAGTTCAAGTTTAAGAATTTGTGCTGCTAAACTAACAGCCAGCCCAAGGAAAGGTAGGAGCTTAAGATATGGTGCTGAACTTGACATTCTTGGTTCATTGAGGAAGCCCCTTGAACCTGATTTTACTGATGATGATAGTTGA 1923 0.4295 MEEADEGSFGGSTRTSFRDELDTNKLMENKESHLSMLAYEMSGKQKFEKDAIGRSLDGRELSRVFSEDYDAAQMLILDPRGTRVNKWNKIFLAACLISLFVDPLFFYLPVAKKDKCIDMSTGLEVSLTIIRSLVDAFYIIQIYFRFQTAYIAPSSRVSGRGELIIDSSKIASKYLQKDFWLDLVAAQPLPQVLGSSWYLLSIERQNECWKKACTLQYPYCQYHYLECQSIGDPNRIAWLRSSNLSDLCDQNSDFFHFGIFADALTLEITGSKFFNKYCYCLWWGLRNLSSVGQNLLTSTRVAEINFAVIVAILGLVLFALLIGNMQTYLQSTTTRLEEWRIRRTDTERWMHHRQLPHYLKQNVRRHDQFRWVATRGVDEETILRDLPVDLRRDIKRHLCLNLVRQVPLFDQMDERMLDAICERLKPSLFTPGTCVVREGDLVNEMLFIVRGRLDSCTTNGGRTGFFNTCRIGSGDFCGEELLPWALDPRPTVVLPSSTRTVKAITEVEAFALIAEDLKFVAAQFRRLHSKQLRHTFRFHSHQWRTWAACFIQAAWFRYKRMKETSDLKKKENVMMSYVPGTGTEHFSAPLQPLMSSSLRICAAKLTASPRKGRSLRYGAELDILGSLRKPLEPDFTDDDS* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0491 640 PRINTS EAG/ELK/ERG potassium channel family signature 131 141 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr8g0491 640 PRINTS EAG/ELK/ERG potassium channel family signature 142 151 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr8g0491 640 PRINTS EAG/ELK/ERG potassium channel family signature 277 294 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr8g0491 640 PRINTS EAG/ELK/ERG potassium channel family signature 303 314 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr8g0491 640 PRINTS EAG/ELK/ERG potassium channel family signature 321 330 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr8g0491 640 PRINTS EAG/ELK/ERG potassium channel family signature 371 378 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr8g0491 640 ProSiteProfiles cAMP/cGMP binding motif profile. 408 493 IPR000595 -
Apr8g0491 640 Gene3D Helix hairpin bin 334 399 - -
Apr8g0491 640 SMART cnmp_10 408 539 IPR000595 -
Apr8g0491 640 CDD CAP_ED 408 539 IPR000595 -
Apr8g0491 640 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 37 193 - -
Apr8g0491 640 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 191 637 - -
Apr8g0491 640 MobiDBLite consensus disorder prediction 1 22 - -
Apr8g0491 640 Gene3D Jelly Rolls 406 526 IPR014710 -
Apr8g0491 640 SUPERFAMILY cAMP-binding domain-like 337 530 IPR018490 -
Apr8g0491 640 Pfam Ion transport protein 192 335 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Apr8g0491 640 PANTHER PROTEIN CNGC15A 37 193 - -
Apr8g0491 640 PANTHER PROTEIN CNGC15A 191 637 - -
Apr8g0491 640 SUPERFAMILY Voltage-gated potassium channels 78 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0491 Apr-Chr8 4270124 4275636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0491 191 638 Ion Channels AT2G28260 64.062 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0491 K05391 - gmx:100815543 842.417