Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0482 ATGCAAACTCTCCGTAACCTCTCTCACTATTCTTCTCTCTTTCTTCTTCTTCTTCTTCTATCTCTATTCCTCTTCCTTCCCAACACCGCACACTCCTTCGGTGCAATGGGACCCATCTCCGCTTCCTTCGGGAAAGACGAGGTTTTTTGCGCCATCGATGCCAGTGGCAAGCAAGACGTTATTTGCTGGGGGGACAACGCCACGTCATCGCCTCTTCCCTCGTTCACCAACGTTCTCCCTGCCATGTCAGCGCTTTCCGGCGGAGAAGGTTTTCTCTGTGGCATTTTAGCGAACACTTCTCAAGCTTATTGCTGGGACGCAACCACCAGGCCAAGCTCAGATCTTGTTCTCGTGCCTCCAGCGTACCGGAACACCGCTTATTCCCATATCGCCGCTGGCAAGAGCCACGTCTGCGCCGTCAGAGGATCCTACTACGCCGATCGCGATTCCGGCAACGTGGATTGCTGGGAAATCTCGACCACCGCGAATAGGACCTTAGTGGCGAAACTCAGTGATTCGTTCTACGATCAATCCACGGCGAATCTGGAGGTGAAGACGGTTGTTTCCGGCGAGGGGTTCACCTGCGGCGAGGTGAGGAATGGTGGGCTCGTGTGTTGGGGACCCGATTCAGGGAGCTTGGGAATTTCCAACGTGAGGGAGAGTTTCACGGTGTTGGCGTCGGGTCGGAGCTCCGTTTGTGGGGTGTTTAACGTTTCGGGTGAATTGAAATGTTGGGGCGACCCGGGTTCGTTTTCGGATCCTCCAGTGGGTGAGATTCGGTTGGTGTCTTTATCTGCTGGGGCGAGGCATTTTTGTGGAGTGAGAATGGATAATCATGTTGTGGAGTGTTGGGGTGCTTTGAATTCCTCTGTGGTTCCTAAAGGTTATGGCTTTATGGCTATTGCTTCTTCGGATTACACTACTTGTGGCATAAGAGAAGATGATCTTCTTTTGGATTGTTGGTTGGTGAATGCTTCTAAGCCTGATTTTGATCCTCCTATGGAGCTTTCAAGTCCTGGGTTATGCATGGCTGGTTCTTGTGGGATTGGGGAATTTGCTTTCAATGTGAGTGTTCTCAATGAGCCTGATTTGACGAGTCTTTGTGTTAAGGAGGGTTTGAGGATTTGTTCACCTTGTGGGTTGAACTGTTCTCAAGGTTTCTTTTTGTCTAGTCCTTGTACTGTGAACATGGATAGAGTTTGCACTGCTTGTTCTCTTTGCCAGAACAGTTCTTGTTTTGGTGTTTGTGGGCTTCACTCTTCAACGGGATTGCATTGGCATCGATTGCGTAGATGGGTGGTGATAGTTGGGTTTTCAGTGTTGGGTTTTTTGATGATTTTGACTTGTGGGTGTGTTTTTATCCGTTTGGTTGCTGCTAGAAGAGCAAGGGGAAAGAAGCAGTCCAAGTCTTGCATAGGTAAAGCGGAGCAAGAGGATGATGTGAACGTTGCTCTTCACTCTTCTCCTTCCGTGGCTTCTTGTCCTGGTGTGCCTCAGGTTTTTAGGCTTTCAGAGTTGAAAGATGCTACTAATGGGTTTAAGGAGTTTAATGAGCTTGGAAGGGGGAGTTATGGGTTTGTTTACAAAGCTGCATTGGCTGATGGGAGAGTGGTTGCTATGAAGAGAGCAAATGCTGCAACCATAATTCACACAAATAACCGTGATTTTGAAATGGAGCTGGAAATTCTATGCAAAATTCGCCATTGTAATATTGTTAACTTGTTGGGTTATTGCGCGGAGATGGGAGAGAGGTTACTTGTTTATGAGTATATGCCTCATGGGACCCTTTATGATCACCTCCATGGTGGCCTTTCACCTCTTAATTGGAGCCTAAGGCTGAAGATAGCTATGCAGGCTGCAAAGGGGCTTGAGTATCTTCACAAGGAACTAGTGCCACATAAGGATCTTAAAAGCTCAAACATTCTTTTGGATTCGGATTGGGGGGCCAGAATTTCTGACTTTGGACTCCTTACTTCAAGTGACAAAGAGCTTAATGGGGACCTTGAAAATGATGTTTACAATTTTGGGATTGTGTTGTTGGAGATTCTAAGTGGAAGGAAGGCTTATGATAGAGATTTTACTCCACCAAACGTGGTTGAATGGGCAGTGCCTTTGATCAAACAAGGGAAAGGAGCTGCCATAATTGATAGGTATGTGGCTCTTCCAAGAAATGTTGAACCTTTGCTTAAGCTTGCTGATATAGCAGAGCTTGCTGTGAGAGAGAATCCAACTCAACGTCCACCAATGTCAGATATAGCATCTTGGTTGGAGCAAATTGTGAAGGATGGATTGATCTTAAATGCTCATTGA 2310 0.4697 MQTLRNLSHYSSLFLLLLLLSLFLFLPNTAHSFGAMGPISASFGKDEVFCAIDASGKQDVICWGDNATSSPLPSFTNVLPAMSALSGGEGFLCGILANTSQAYCWDATTRPSSDLVLVPPAYRNTAYSHIAAGKSHVCAVRGSYYADRDSGNVDCWEISTTANRTLVAKLSDSFYDQSTANLEVKTVVSGEGFTCGEVRNGGLVCWGPDSGSLGISNVRESFTVLASGRSSVCGVFNVSGELKCWGDPGSFSDPPVGEIRLVSLSAGARHFCGVRMDNHVVECWGALNSSVVPKGYGFMAIASSDYTTCGIREDDLLLDCWLVNASKPDFDPPMELSSPGLCMAGSCGIGEFAFNVSVLNEPDLTSLCVKEGLRICSPCGLNCSQGFFLSSPCTVNMDRVCTACSLCQNSSCFGVCGLHSSTGLHWHRLRRWVVIVGFSVLGFLMILTCGCVFIRLVAARRARGKKQSKSCIGKAEQEDDVNVALHSSPSVASCPGVPQVFRLSELKDATNGFKEFNELGRGSYGFVYKAALADGRVVAMKRANAATIIHTNNRDFEMELEILCKIRHCNIVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKIAMQAAKGLEYLHKELVPHKDLKSSNILLDSDWGARISDFGLLTSSDKELNGDLENDVYNFGIVLLEILSGRKAYDRDFTPPNVVEWAVPLIKQGKGAAIIDRYVALPRNVEPLLKLADIAELAVRENPTQRPPMSDIASWLEQIVKDGLILNAH* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0482 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Apr8g0482 769 ProSiteProfiles Protein kinase domain profile. 513 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0482 769 Gene3D Transferase(Phosphotransferase) domain 1 591 665 - -
Apr8g0482 769 PANTHER OS01G0750732 PROTEIN 36 764 - -
Apr8g0482 769 SUPERFAMILY Protein kinase-like (PK-like) 489 757 IPR011009 -
Apr8g0482 769 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 36 764 - -
Apr8g0482 769 Pfam Protein kinase domain 513 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0482 769 Gene3D Transferase(Phosphotransferase) domain 1 666 764 - -
Apr8g0482 769 Gene3D - 30 162 IPR009091 -
Apr8g0482 769 Gene3D Phosphorylase Kinase; domain 1 475 590 - -
Apr8g0482 769 SUPERFAMILY RCC1/BLIP-II 57 317 IPR009091 -
Apr8g0482 769 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Apr8g0482 769 SMART serkin_6 513 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0482 769 Gene3D - 163 295 IPR009091 -
Apr8g0482 769 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 346 401 IPR001368 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0482 Apr-Chr8 4123199 4125798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0482 4 758 Receptor kinase-like Gene Family AT3G59420 30.366 9.37e-108 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Apr8g0482 Pkinase 6.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0482 - - gmx:100802259 1295.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0482 8 4123199 4125798 Apr8g0482 8 4123199 4125798 ECH