Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0472 ATGGATTCAACAGAAGAAGAAAACTCAAAGCGGCATTGGTCCCTCGAAGACTTCGAGATCGGTAAACCTCTCGGTAGGGGCAAATTTGGCAGAGTCTACGTCGCCAGAGAACTCAAGAGCAAGTTTGTTGTGGCATTGAAGGTTATATTTAAGGAACAAATTGATAAGTACAGAATTCGTGATCAACTGAAGAGAGAGATGGAGATACAAAGCAATCTTCGACACCCCAACATCCTGCGTCTTTATGGTTGGTTCCATGATGCCGAGCGTGTTTTCTTGATTCTTGAGTATGCTCATAATGGAGAGCTTTACAAGGAGCTAAGAAAAAAGGGTCATCTCACTGAGAAGCAAGCTGCTACGTATATGTTGAGCCTCACAAAGGCGTTGGCTTATTGTCACGAGAAGCATGTTATTCATAGGGACATCAAGCCCGAAAATTTGTTACTCGACCATGAGGGTCGTCTTAAAATTGCGGACTTTGGTTGGTCTGTACAGTCTAGCAGCAAAAGACATACCATGTGTGGAACGTTGGATTATTTAGCACCAGAAATGGTTGAAAGCAAAGCTCATGACTTTGCAGTTGATAACTGGACTCTGGGTATCCTGTGTTATGAGTTCCTCTATGGTGCTCCTCCATTTGAGGCTGAGAGTCAAGCTGATACCTTCAAAAGGATAATGAAGGTTGACCTAACATTCCCTTCCACCCCTTGTGTTTCTTTAGATGCCAAAAATCTTATTAGTCGGCTCCTGGTGAAAGACTCTTCACGAAGGCTCTCTCTTCAGAAGATAATGGAGCATCCTTGGATAATAAAGAATGCAGATCTTATGGTTATCTGCAAGTAG 843 0.4294 MDSTEEENSKRHWSLEDFEIGKPLGRGKFGRVYVARELKSKFVVALKVIFKEQIDKYRIRDQLKREMEIQSNLRHPNILRLYGWFHDAERVFLILEYAHNGELYKELRKKGHLTEKQAATYMLSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSSSKRHTMCGTLDYLAPEMVESKAHDFAVDNWTLGILCYEFLYGAPPFEAESQADTFKRIMKVDLTFPSTPCVSLDAKNLISRLLVKDSSRRLSLQKIMEHPWIIKNADLMVICK* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0472 280 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Apr8g0472 280 CDD STKc_Aurora 17 269 - -
Apr8g0472 280 PIRSF ILK 2 272 - -
Apr8g0472 280 Pfam Protein kinase domain 18 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0472 280 SUPERFAMILY Protein kinase-like (PK-like) 11 273 IPR011009 -
Apr8g0472 280 Gene3D Transferase(Phosphotransferase) domain 1 102 276 - -
Apr8g0472 280 Gene3D Phosphorylase Kinase; domain 1 6 101 - -
Apr8g0472 280 SMART serkin_6 18 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0472 280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Apr8g0472 280 ProSiteProfiles Protein kinase domain profile. 18 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0472 280 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 4 276 IPR030616 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0472 Apr-Chr8 4013872 4016031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0472 3 274 CBL-interacting serine-threonine protein kinases AT5G25110 38.849 1.95e-63 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Apr8g0472 Pkinase 4.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0472 K08850 - gmx:100800111 525.013