Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0470 ATGGCCGACGATTATGAATTCGTCGATAAAGTTCCTCCTTCCTTCGATCGTGATTCTTCTTCAAAAGGTTTCAACCCAGGATTAATTGTTCTCCTGCTTGTTGTGGGGTTGCTGTTGATATTCCTCGTTGGAAATTATGTATTGTACACATATGCACAGAAGACACTCCCTCCAAGAAAAAAGAAGCCAGTCTCAAAGAAGAAGATGAAAAAGGAGAAACTGAAGCAAGGCATCTCTGCACCTGGAGAGTAG 252 0.4206 MADDYEFVDKVPPSFDRDSSSKGFNPGLIVLLLVVGLLLIFLVGNYVLYTYAQKTLPPRKKKPVSKKKMKKEKLKQGISAPGE* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0470 83 Pfam DNA binding protein S1FA 19 83 IPR006779 GO:0003677|GO:0005634|GO:0006355
Apr8g0470 83 PANTHER DNA-BINDING PROTEIN S1FA2 3 83 IPR006779 GO:0003677|GO:0005634|GO:0006355
Apr8g0470 83 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 83 - -
Apr8g0470 83 MobiDBLite consensus disorder prediction 56 83 - -
Apr8g0470 83 MobiDBLite consensus disorder prediction 59 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0470 Apr-Chr8 3994319 3995887 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Apr8g0470 S1FA 1.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0470 - - gmx:100499820 105.916