Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0463 ATGGGGAGGAAGGGAAATTGGTTTTCTACTGTGAAGAAAGCTCTGAGCCCTGAGTCAAAGGAGAAGAACGATCAGAAATCATGTAGATCAAAGAAAAAATGGTTTGGGAAGCAAAAGTTGCAGACCTCAGACTCATACTCAGAAACTGATAAAGCACCTCCTCTTCCTCCACCTGAGGAGATTATTGTAACTCATGTTGAGAGTGAAAACCATCATGATTGCATTGAGGTTGCAACTACTGTGGTTACTGAGGAACCTGTTTCTGCTGTTCAGACACCAGTTGCTGAGGTTCAAGCCTTTACAATTATTCAGTTTGACTCTAAACCAAAGGATGAAGTGGCAGCAATCAGGATTCAAACAGCTTTTCGGGGATACTTGGCAAGAAGAGCAATGAGGGCTTTAAGGGGGCTGGACAGGTTGAAATCACTGATGGAAGGGCCAGTGGTAAAGCGTCAAGCCATTAATACGCTTCGCTCAATGCAAAGTTTTTCTCATTTGCAATCTCAAATTCGTTCTAGGAGGCTCAGGATGTTAGAGGAGAATCAAGCTCTTCAAAAACAGCTTTTGCAGAAGCACACAAAAGAGCTAGAGACCATGCAGATTGGTGAGGAATGGGATGACAGCGTACAATCAAAAGAACAAATTGAAGCCAAGTTACTAAGCAAGTACGAGGCTACTATGAGAAGAGAAAGAGCAATGGCATATTCATTCTCTCATCAGCAAAACTGGAAGAACTCATCAAGATCTATAAATCCAATGTTCATGGATCCAACCAATCCTGCATGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCACGACCGTGGGAGAACCATGGCCTAATGGAGAAAGAGAAGAATGAGCATTCATCTGTAAGAAGTTCTAGCCGCGGCATTACAAGTGCCGAAATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCTGAAAAGCATTCTCCAACAGCAAGCCAAAATCCAGGCTCACCAAACTCACAGTCTCAATCTCTTTCAAATCCTCCAAAACCAGCTTCTACAACAGTTACTAGGAAACTGAAGAAAGTGAGCCAAAAAGATAGCCTTGTTATGGATGATGACACCAAAAGCATGGCTAGTGTGCAATCAGATAGGCTCAAGAGGCACTCAATTGGTGGATCAATAGTGAGAGATGATGAAAGCCTTGCAAGTTCTCCTTCAGTTCCAAGTTACATGGTGCCAACTAAATCTGCAAAAGCTAAGTCTAAAATGCAGAGTCCATTAGCCACTGAGAATGTGACCACTCCAGAGAAGGGGTCTTTTGGCACTGCAAAGAAACGTCTTAGTTTTCCAGCTTCACCTGCTAGACCAAGGAGGCATTCAGGTCCACCAAAGGTTGAAAGCAGTTTCAATGCAGAAATCACTGTGGGAAATGGTGTGAATAGTTGA 1422 0.4346 MGRKGNWFSTVKKALSPESKEKNDQKSCRSKKKWFGKQKLQTSDSYSETDKAPPLPPPEEIIVTHVESENHHDCIEVATTVVTEEPVSAVQTPVAEVQAFTIIQFDSKPKDEVAAIRIQTAFRGYLARRAMRALRGLDRLKSLMEGPVVKRQAINTLRSMQSFSHLQSQIRSRRLRMLEENQALQKQLLQKHTKELETMQIGEEWDDSVQSKEQIEAKLLSKYEATMRRERAMAYSFSHQQNWKNSSRSINPMFMDPTNPAWGWSWLERWMAARPWENHGLMEKEKNEHSSVRSSSRGITSAEISKSFARFQLNSEKHSPTASQNPGSPNSQSQSLSNPPKPASTTVTRKLKKVSQKDSLVMDDDTKSMASVQSDRLKRHSIGGSIVRDDESLASSPSVPSYMVPTKSAKAKSKMQSPLATENVTTPEKGSFGTAKKRLSFPASPARPRRHSGPPKVESSFNAEITVGNGVNS* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0463 473 MobiDBLite consensus disorder prediction 314 350 - -
Apr8g0463 473 Pfam Protein of unknown function (DUF4005) 394 450 IPR025064 -
Apr8g0463 473 MobiDBLite consensus disorder prediction 15 31 - -
Apr8g0463 473 Coils Coil 175 195 - -
Apr8g0463 473 MobiDBLite consensus disorder prediction 314 473 - -
Apr8g0463 473 Pfam IQ calmodulin-binding motif 114 132 IPR000048 GO:0005515
Apr8g0463 473 PANTHER IQ-DOMAIN 5-RELATED 1 468 - -
Apr8g0463 473 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Apr8g0463 473 MobiDBLite consensus disorder prediction 1 58 - -
Apr8g0463 473 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 468 - -
Apr8g0463 473 MobiDBLite consensus disorder prediction 410 430 - -
Apr8g0463 473 SMART iq_5 110 132 IPR000048 GO:0005515
Apr8g0463 473 MobiDBLite consensus disorder prediction 351 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0463 Apr-Chr8 3949744 3953254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0463 1 473 IQD Protein Family AT5G03040 51.546 2.04e-146 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0463 - - gmx:100801847 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0463 8 3949744 3953254 Apr8g0463 8 3949744 3953254 ECH
Apr4g0171 4 1416277 1420613 Apr8g0463 8 3949744 3953254 PCT