Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0454 ATGAAAATTAGCCAACCCTTCTTCCTCTCATCTCTCTCACTCTTTCTGCTACTTCTCTTGCATATTTCTTCTGCTCAGATGCCGGGTTTTGTAAGTTTGGACTGTGGAGGTAAAGAAAAATTCACTGATGAAATTGGTCTTAAATGGACTCCTGATGATAACATTAAGTACGGAGAAATAAGCACTATATCAGTTGCCAACGAGACACGGAAGCAATACACGACACTGCGACACTTTCCTGCTGATTCCAGAAAATACTGCTACACACTTGATGTGTTGAGTAGGACAAGGTACCTACTGAGAGTGACATTCTTGTATGGGAACTTTGATGCAGACAATGTTTATCCAAAATTTGACATTTCTATTGGTGCTACTCATTGGTCGACTATTGTTATATCTGATGCCAACACTGTCGAAGTGAGAGAGCTTATATTTTTGGCTTCAAGTCCTACAGTAAGTGTATGTTTATCAAATGCAACAACTGGGAAGCCATTCATATCTACCCTTGAACTCCGGCAATTCAATGGTTCAGTTTATTATACATACACTGAGGAACACTCTTACCTCAGTGTCTCTGCAAGGATAAATTTTGGTGCAGAGAGTGATGCCCCAATCAGGTATCCTGATGATCCATTTGATAGAATTTGGGAATCGGATTCTCTCAAGAAAGCAAATTATCTTGTTGATGTTGCTGCCGGAACTAGGAAAATTTCCACCAATTTACCAATTAATGTTGACAGTGATGAAATGCCCCCAGTGAAAGTAATGCAAACTGCTGTAGTGGGTACCAATGGATCTCTAACATACCGGTTGAACTTGGATGGCTTTCCTGGTATTGGATGGGCATTCACCTATTTTGCAGAGATTGAAGATTTGGCTGAAGAAGAATCCAGAAAATTCAGGCTTGTACTTCCAGGGCATCCTGATATTAGTAAGGATGTGGTAAATATTGAAGAAAATGCTCCAGGAAAATATCGCCTTTACGAACCAGGATTCACCAATTTATCCCTACCCTTTGTGTTGTCCTTTAAATTTGCCAAAACATCTGATTCTTCCAGGGGCCCTCTTCTAAATGCCATGGAGATTAATAAGTATCTTGAGAAAAATAATGGCTCTCCTGATGGAGAAGCTATATTGAGTGTACTTTCGCAATACTCATCAGCAGATTGGGCACAAGAAGGGGGTGATCCATGTCTACCTGTTCCATGGTCATGGATCCGCTGTAACACAGATCAGCAGCCAAGAATAGTCTCAATTTTGTTGTCTAATAAAAACTTGACCGGGAATATTCCTTTGGACATCACCAAATTGACTGGTCTGGTAGAATTATGGCTTGATGGAAATATGTTGACTGGCCCAATACCAGATTTCACTGGATGCATGGACTTAAAGATCATTCATCTCGAGAACAATCAGTTGACTGGTGCGCTCCCAACCTCTTTGGCAAACCTTCCAAATTTGAGGGAACTGTATGTCCAAAATAATAGGTTGTCTGGAACTGTACCATCAGGTCTTCTGAGCAAAGATTTGGTTTTGAACTACTCTGGAAACATTAATCTTCATAAAGGGAGCAGAAAAAATAGCCACACCAATGTGATTATTGGTTCAGTAACTGGGGCTGTCGTTCTACTTTTGGCCACTATCATATCTTGCTTGTTTATGCATAAAGGAAAGAAAAATTATTCTAAACAAGATGGCCTGGTTTCTCTCCCTTCTCAAAGTTTGGATTCTTCTAAGAGTGTTGGTCCTGCAGAAGCTGCTCACTGCTTCAGCTTTTCTGAAATTGAAAATTCTACAAATAATTTTGAGAAAGAAGTAGGTTCTGGAGGTTTTGGAGTTGTTTACTATGGGAAACTGAAAGATGGAAAAGAGATAGCAGTTAAAGTTCTAACCACTAATTCTTATCAAGGAAAACGAGAGTTCTCCAATGAGGTGACTCTTCTCTCAAGAATACATCACAGAAACTTAGTACAACTTCTTGGTTATTGCCGAGAAGATGAAAATAGCATGCTTATTTATGAGTTCATGCATAATGGAACTCTGAAGGAACATCTTTATGGTCCATTAACAAGAGGACGGAGTATTAATTGGATTAAGCGTCTTGAGATTGCAGAAGATGCTGCAAAAGGGATTGAATATCTTCACGCAGGCTGTGTTCCTGCAGTCATCCATAGAGACTTAAAAAGCAGCAATATTCTTCTTGACAAGCACATGAGAGCCAAGGTTTCTGATTTTGGTCTTTCTAAACTTGCTGTTGATGGAGCCTCCCATGTTTCTAGTGTAGTTCGGGGGACATTAGGATATGTGGATCCTGAGTACTATATTTCCCAGCAGCTTACTGACAAGAGTGATATATACAGTTTTGGTGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCTAATAACAACTTTGGAGCAAATTGCCGAAACATAGTCCAGTGGGCAAAATTACACATTGAGAGTGGAGATATACAAGGTATTATTGATCCTGCGCTACAAAACAACTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTGAGCCTCATGCAAATATGAGGCCATCAATTTCAGAAGTTCTGAAGGACATCCAAGATGCAATCGCTATTGAGAGAGAGGCCGAAGGCAATTTTAATGAGCCAAGAAATTCAGTTCATTCTTCTATCAACACAGGTTCTATGGATTTGGTTGCAACTGAGAGCTACGTTTCAATTGATGAGTCCATTGCACAGCCTACTCCACGATAG 2772 0.3979 MKISQPFFLSSLSLFLLLLLHISSAQMPGFVSLDCGGKEKFTDEIGLKWTPDDNIKYGEISTISVANETRKQYTTLRHFPADSRKYCYTLDVLSRTRYLLRVTFLYGNFDADNVYPKFDISIGATHWSTIVISDANTVEVRELIFLASSPTVSVCLSNATTGKPFISTLELRQFNGSVYYTYTEEHSYLSVSARINFGAESDAPIRYPDDPFDRIWESDSLKKANYLVDVAAGTRKISTNLPINVDSDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPGIGWAFTYFAEIEDLAEEESRKFRLVLPGHPDISKDVVNIEENAPGKYRLYEPGFTNLSLPFVLSFKFAKTSDSSRGPLLNAMEINKYLEKNNGSPDGEAILSVLSQYSSADWAQEGGDPCLPVPWSWIRCNTDQQPRIVSILLSNKNLTGNIPLDITKLTGLVELWLDGNMLTGPIPDFTGCMDLKIIHLENNQLTGALPTSLANLPNLRELYVQNNRLSGTVPSGLLSKDLVLNYSGNINLHKGSRKNSHTNVIIGSVTGAVVLLLATIISCLFMHKGKKNYSKQDGLVSLPSQSLDSSKSVGPAEAAHCFSFSEIENSTNNFEKEVGSGGFGVVYYGKLKDGKEIAVKVLTTNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREDENSMLIYEFMHNGTLKEHLYGPLTRGRSINWIKRLEIAEDAAKGIEYLHAGCVPAVIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGASHVSSVVRGTLGYVDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNNNFGANCRNIVQWAKLHIESGDIQGIIDPALQNNYDLQSMWKIAEKALMCVEPHANMRPSISEVLKDIQDAIAIEREAEGNFNEPRNSVHSSINTGSMDLVATESYVSIDESIAQPTPR* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0454 923 ProSitePatterns Protein kinases ATP-binding region signature. 606 628 IPR017441 GO:0005524
Apr8g0454 923 ProSiteProfiles Protein kinase domain profile. 600 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0454 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Apr8g0454 923 PANTHER OS07G0107800 PROTEIN-RELATED 13 898 - -
Apr8g0454 923 PANTHER TYROSINE KINASE DOMAIN PROTEIN 13 898 - -
Apr8g0454 923 Gene3D Transferase(Phosphotransferase) domain 1 676 896 - -
Apr8g0454 923 Gene3D Phosphorylase Kinase; domain 1 574 675 - -
Apr8g0454 923 SUPERFAMILY L domain-like 401 517 - -
Apr8g0454 923 CDD STKc_IRAK 606 873 - -
Apr8g0454 923 Pfam Malectin-like domain 33 363 IPR024788 -
Apr8g0454 923 SMART serkin_6 600 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0454 923 Pfam Protein kinase domain 603 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0454 923 Pfam Leucine rich repeat 457 497 IPR001611 GO:0005515
Apr8g0454 923 Gene3D Ribonuclease Inhibitor 375 531 IPR032675 -
Apr8g0454 923 SUPERFAMILY Protein kinase-like (PK-like) 579 871 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0454 Apr-Chr8 3876038 3882770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0454 23 710 Receptor kinase-like Gene Family AT2G37050 69.209 0.0 1008
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Apr8g0454 Malectin_like 3.1e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0454 - - gmx:100798007 1622.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0165 4 1371097 1378922 Apr8g0454 8 3876038 3882770 PCT