Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0447 ATGAGTGTCGATGGCGACAGCAAAGAACTGAATCAGCGCTTACGAGATGGGAAGAAGATTGCTGGTGGGGAACATGGCTTATGTGAGGGCGATGAAGTGAAATGTAATGGAGTGGCTGAAGAAGTTAAGGTTGGACAGGGGGGGACTGTGGAATTCTCCTCTGTCCAGCAGCATATACCACAGCAACAGCCTCAAGGGGCAATAATTTGTTGGGAGAGATTTTTGCATATTAGATCCCTTAAGGTCTTGCTTGTGGAGAATGATGACTCTACCCGCCATGTTGTCACTGCCCTGCTTCGTAATTGTAGTTATGAAGTTATTGATGCAGCAAATGGATTGCAAGCTTGGAAGATATTGGAGGATTTAACCAATCATATCGATCTTGTTTTGACTGAGGTAGCAATGCCAGGTTTATCAGGCATCGGTCTTCTATACAAGATTATGGGCCACAAAATGCGGAAAAATATTCCAGTAGTTATGATGTCATCTCATGATTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGAGCTGTTGACTTTCTTGTTAAACCCATACGGAAGAATGAGCTTAAAAATCTTTGGCAGCATGTTTGGAGAAGATGTCACAGTTCTAGTGGAAGTGGCAGTGAAAGTGGCACACAAACCCAGAAGTCTGTAAAATCAAAGAGTCTTGAGAAGTCTGATAATAATTCTGGAAGCAATGATGAGGATGACAATGGAAGTGTGGGCCTGAATAATGGGGATGGAAGTGACAATGGTAGTGGCACTCAGAGCTCATGGACCAAACGTGCTGTTGAAGTTGATAGTCCTAAGCCAGTCTCCCAGTGGGATCAAATAGCTGAATGTCCTGATAGTACCTGTGCTCAAGTTGTTCACTCCAATGCTGAAATAGGTGGGAAGAAGGTGGTTCCTCTGGCTGCAAAGGAGTGTCCAGAACAGAAGGAACAACTTGGTTCTAAACATAGCAACACGCTTGATGTTGGCCCCTCTAAATTCAATGAGCAAATAAATAGAGGACAACTGAACCTTAATTGTGAGAATCAATCTAGCAAGCTAAGGTGCAAAGGTCTATCATTGTCTGATGCTGTTACTAGCACTTCTGATTCTCAGATGCATAGTGGTGAATTTGAAGCCCTAAATAGAAGACCCAAATCCTCCGATGTTGAAAATAAAGGTACTAATAATGATGAAGAATTGCCGTCTCTTGAGCTCAGTTTAAAGAGGCTTAGAGGAGTTAAAGATGCAGGTATTACAATTCAGGATGAACGGAATGTTTTAAGACGTTCTGATCTGTCTGCTTTCTCAAGGTACAATGCCCCTAACACTAAGAAGTCTCCCACTGGATGTGTTGGAAGCAATTCTCCACATAATAATAGCTTAGAAGTTACAAAAAAGGATTCATCTCGAGATATTCAATCTCACTCTAGTGGCAATCCTCCTAACCAGAACTCAAATGGTGCTAGCAATAACATTGATATGGGATCCACTAATAATAATGCTTATGCTAAATCTGCAGTTATAAGTGAGCCAGCAGTAGCATCGACAACCAAATGTTTGTACCAAACATCTGCTTTCCAGCCTTTAAAGAACAATGTTGTTTGTACCTCTCAACAAGTTGCCTTGCATAATACTGAAGATACAACAGCAACAATGCTGGCACCACCTAAAGCAGACAGACATAAGGATTCTGCAACTCAGGACTTCCATCACCATTATGAAAACCATAACTGTATTGCTGACAACATGCAGCACCCGCTGCCACCAGATCATGATGCTGAATCCTTAAAGAAAATGGCTACTGCTGCACCACATTGTGGCTCATCAAATGTGGTTGAAGGGCCAATTGAAGGTAATGTTGGAAATCACAGTATTAATAGAAGTGCTTCTGGCAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCACAGCAGTTAATGCTGGAGGGACAAATATGGAAAGCAACAATGGACTCACTGGGAATAGTGGCAGTGGCGATGCTAGTGGGAGTGGAAGTGCCAACAGAGCAGATCAAAACAAGACTTCTCAAAGGGAAGCAGCCTTAACTAAATTTCGTCAGAAGAGAAAAGAGAGAAAGGAGAGGTGCTTTCATAAAAAGGTTCGATATCAGAGCAGAAAGAAATTAGCTGAACAACGACCTCGATTTCGTGGACAATTTGTGCGACAGCCCTCAAACGAAAATGCAAGTGAGGCAACTGATAGCTGA 2229 0.4235 MSVDGDSKELNQRLRDGKKIAGGEHGLCEGDEVKCNGVAEEVKVGQGGTVEFSSVQQHIPQQQPQGAIICWERFLHIRSLKVLLVENDDSTRHVVTALLRNCSYEVIDAANGLQAWKILEDLTNHIDLVLTEVAMPGLSGIGLLYKIMGHKMRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSLEKSDNNSGSNDEDDNGSVGLNNGDGSDNGSGTQSSWTKRAVEVDSPKPVSQWDQIAECPDSTCAQVVHSNAEIGGKKVVPLAAKECPEQKEQLGSKHSNTLDVGPSKFNEQINRGQLNLNCENQSSKLRCKGLSLSDAVTSTSDSQMHSGEFEALNRRPKSSDVENKGTNNDEELPSLELSLKRLRGVKDAGITIQDERNVLRRSDLSAFSRYNAPNTKKSPTGCVGSNSPHNNSLEVTKKDSSRDIQSHSSGNPPNQNSNGASNNIDMGSTNNNAYAKSAVISEPAVASTTKCLYQTSAFQPLKNNVVCTSQQVALHNTEDTTATMLAPPKADRHKDSATQDFHHHYENHNCIADNMQHPLPPDHDAESLKKMATAAPHCGSSNVVEGPIEGNVGNHSINRSASGSNNGSNGQNGSSTAVNAGGTNMESNNGLTGNSGSGDASGSGSANRADQNKTSQREAALTKFRQKRKERKERCFHKKVRYQSRKKLAEQRPRFRGQFVRQPSNENASEATDS* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0447 742 SMART REC_2 80 195 IPR001789 GO:0000160
Apr8g0447 742 MobiDBLite consensus disorder prediction 204 276 - -
Apr8g0447 742 MobiDBLite consensus disorder prediction 473 496 - -
Apr8g0447 742 MobiDBLite consensus disorder prediction 437 462 - -
Apr8g0447 742 Pfam CCT motif 685 730 IPR010402 GO:0005515
Apr8g0447 742 SUPERFAMILY CheY-like 78 204 IPR011006 -
Apr8g0447 742 MobiDBLite consensus disorder prediction 366 400 - -
Apr8g0447 742 MobiDBLite consensus disorder prediction 621 687 - -
Apr8g0447 742 Pfam Response regulator receiver domain 82 193 IPR001789 GO:0000160
Apr8g0447 742 MobiDBLite consensus disorder prediction 605 742 - -
Apr8g0447 742 MobiDBLite consensus disorder prediction 695 713 - -
Apr8g0447 742 MobiDBLite consensus disorder prediction 204 221 - -
Apr8g0447 742 Gene3D - 79 235 - -
Apr8g0447 742 CDD psREC_PRR 82 185 - -
Apr8g0447 742 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 22 314 - -
Apr8g0447 742 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 297 719 - -
Apr8g0447 742 MobiDBLite consensus disorder prediction 376 400 - -
Apr8g0447 742 ProSiteProfiles Response regulatory domain profile. 81 199 IPR001789 GO:0000160
Apr8g0447 742 MobiDBLite consensus disorder prediction 726 742 - -
Apr8g0447 742 ProSiteProfiles CCT domain profile. 688 730 IPR010402 GO:0005515
Apr8g0447 742 PANTHER TWO-COMPONENT RESPONSE REGULATOR 297 719 IPR045279 GO:0009736
Apr8g0447 742 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 314 IPR045279 GO:0009736
Apr8g0447 742 MobiDBLite consensus disorder prediction 437 496 - -
Apr8g0447 742 MobiDBLite consensus disorder prediction 235 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0447 Apr-Chr8 3806783 3818134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0447 156 730 Response Regulator Gene Family AT5G02810 47.352 1.31e-115 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Apr8g0447 Response_reg 6.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0447 K12129 - gmx:100796933 1227.62