Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0446 ATGGGTTGGATTCCCTGTTCTGGAAGTTCAAGCACTAAGAAGAAGTTAAAGAAAAAGTTGGAGAAGATGGAAACGCAGAACAGCCTAGTTGATCCGATCAAAGCCACCCCAGGGAAATTAAAGAGGAATTCATCCATGAATTCCAAAGATTCCTCTAAAAATGGAAACACTGATCACATTGCTGCACAAACATTCTCATTCCGTGAGTTGGCAACTGCAACTAGAAATTTCAGAGCTGAATGCCTTTTGGGTGAGGGAGGATTTGGCAGGGTATACAAAGGGCGTTTGGAAAGTATTAATCAGATTGTTGCAATTAAACAACTTGACCGAAATGGGCTACAAGGGAATAGAGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTTCTTCACCACCCTAACCTTGTCAACCTGATTGGTTATTGTGCTGATGGGGATCAGAGGCTTCTAGTTTATGAATATATGTCATTAGGATCCTTGGAAGACCACTTACATGATATTTCTCCTGGCAAGAAACGACTTGACTGGAACACACGAATGAAAATAGCAGCGGGGGCAGGAAGGGGATTAGAATATCTACATGACAAAGCTAATCCTCCTGTTATTTACCGAGATTTAAAGTGCTCCAACATTTTGCTTGGCGAAGAATATCATCCAAAGTTATCTGATTTTGGTCTGGCTAAACTTGGCCCAGTAGGGGAGAACACTCATGTATCAACAAGAGTTATGGGAACCTATGGATATTGTGCTCCAGAGTATGCAATGACAGGTCAACTGACTCTCAAATCAGATGTCTATAGCTTTGGTGTTGTTCTTCTGGAAATAATTACAGGAAGGAAAGCAATTGACAATTCAAAGTCTGCAGGAGAGCAGAATCTTGTTGCATGGGCCAGACCCTTGTTTAAAGATCGAAGAAAGTTTCCACAAATGGCTGATCCAATGCTTCAAGGACAATATCCTCAAAGAGGGCTATACCAGGCCCTTGCTGTAGCAGCAATGTGTGTTCAGGAGCAGGCCAATATGCGCCCAGTTATAGCTGATGTTGTCACGGCTCTGAGTTACCTTGCTTCACAAAGATATGACCCCGATACACAGACAGTACAAAGCTCACGCTTCGCTCCTTGTACTCCTCCTAGAACCAAGAGGGGGCAGTGA 1152 0.4288 MGWIPCSGSSSTKKKLKKKLEKMETQNSLVDPIKATPGKLKRNSSMNSKDSSKNGNTDHIAAQTFSFRELATATRNFRAECLLGEGGFGRVYKGRLESINQIVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMSLGSLEDHLHDISPGKKRLDWNTRMKIAAGAGRGLEYLHDKANPPVIYRDLKCSNILLGEEYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFKDRRKFPQMADPMLQGQYPQRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRYDPDTQTVQSSRFAPCTPPRTKRGQ* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0446 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Apr8g0446 383 MobiDBLite consensus disorder prediction 1 57 - -
Apr8g0446 383 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Apr8g0446 383 Pfam Protein kinase domain 81 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0446 383 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0446 383 Gene3D Phosphorylase Kinase; domain 1 46 153 - -
Apr8g0446 383 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 381 - -
Apr8g0446 383 MobiDBLite consensus disorder prediction 40 57 - -
Apr8g0446 383 CDD STKc_IRAK 83 351 - -
Apr8g0446 383 Gene3D Transferase(Phosphotransferase) domain 1 154 372 - -
Apr8g0446 383 PANTHER OS07G0668900 PROTEIN 1 381 - -
Apr8g0446 383 MobiDBLite consensus disorder prediction 364 383 - -
Apr8g0446 383 SUPERFAMILY Protein kinase-like (PK-like) 58 351 IPR011009 -
Apr8g0446 383 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0446 Apr-Chr8 3792161 3796050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0446 13 356 Glycoside Hydrolase AT3G07070 65.994 6.91e-170 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Apr8g0446 Pkinase 9.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0446 - - gmx:100499648 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0155 4 1289245 1292949 Apr8g0446 8 3792161 3796050 PCT