Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0440 ATGGTTAGATCCTGTTGGAAACCAATTGCAGATGGTGACGAAGGAGATGGAAGCGGGAGAGTTGATGGATTGCTATGGTACAAGGACTTAGGGAGCCATCTTTATGGGGAATTCTCAATGGCTGTGGTTCAGGCCAATAGTTCATTAGAGGATCGAAGTGAACTTGAATCTGGACCCTTGAGTTCCAACCACTTGGGTCCTCAAGGAACCTTTATAGGTGTATATGATGGCCATGGTGGAAGCGAGGCCTCACAGTTTGTCAGTGACAATCTTTTCTGCAATCTCAAAAAGCTTGCAGCTGAACATCAAGGTGTGTCAGAAAATGTTATCAAAAGGGCATATTCAGCAACTGAAGAGGGTTTTCTGTCTCTTGTGAAGAAACAGTGGCTGATTAAGCCACAGATTGCATCCACTGGTACTTGTTGTTTGGTGGGGGTAATTTGCGATGGCATGATCTATATTGCAAATTCTGGAGACTCCCGAGTGGTGTTAGGAAGATTGGAGAGAGCAACAAGGGAAATAGAAGCTATACAATTATCTAAAGAACACAATGTTAACCAAGAAGGAGTGAGAGATGAACTTCGGTCAAAGCACCCTTTTGATTCACAAATCGTGGTTATGAGACAGAACGTTTGGCGTGTGAAAGGCCTCATACAGGTTTCACGATCCATAGGTGATGCATATCTGAAGAAAGCAGAATTTAACAGGGAGCCTCTACCAATGAAGTTTAGACTACCAGAAACATTCTTCAAGCCAATTCTTAGCTCTGAGCCATCAACATCATTGCACAAACTCCACCCCGATGATCAATTTCTCATATTTGCTTCTGATGGTTTATGGGAGCATCTTAGCAACCAAGAGGCTGTTAACATAGTCAGCAATAACCCACCTAATGGAATTGCTAGGCGACTTGTGAAAGCAGCACTAAGAGAAGCTGCTAAGAAGAGTGAAATGAGACTTGCTGACCTCCAAAAGATTGAACAAGGGATGAGGAGACACTTCCATGATGACATAACAGTGATTGTTGTGTTCATAAATTCCAAAATTACTGATAACAGCTCTTTCTGTGGTTCTCCTCTTTCAATCAAGGGAGGTGGGTCTGCCAATTCCTAG 1113 0.4295 MVRSCWKPIADGDEGDGSGRVDGLLWYKDLGSHLYGEFSMAVVQANSSLEDRSELESGPLSSNHLGPQGTFIGVYDGHGGSEASQFVSDNLFCNLKKLAAEHQGVSENVIKRAYSATEEGFLSLVKKQWLIKPQIASTGTCCLVGVICDGMIYIANSGDSRVVLGRLERATREIEAIQLSKEHNVNQEGVRDELRSKHPFDSQIVVMRQNVWRVKGLIQVSRSIGDAYLKKAEFNREPLPMKFRLPETFFKPILSSEPSTSLHKLHPDDQFLIFASDGLWEHLSNQEAVNIVSNNPPNGIARRLVKAALREAAKKSEMRLADLQKIEQGMRRHFHDDITVIVVFINSKITDNSSFCGSPLSIKGGGSANS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0440 370 Gene3D - 28 354 IPR036457 -
Apr8g0440 370 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Apr8g0440 370 Pfam Protein phosphatase 2C 56 314 IPR001932 -
Apr8g0440 370 PANTHER ALPHABET, ISOFORM E-RELATED 3 368 - -
Apr8g0440 370 SUPERFAMILY PP2C-like 62 346 IPR036457 -
Apr8g0440 370 CDD PP2Cc 35 345 IPR001932 -
Apr8g0440 370 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Apr8g0440 370 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 368 - -
Apr8g0440 370 SMART PP2C_4 31 343 IPR001932 -
Apr8g0440 370 Coils Coil 306 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0440 Apr-Chr8 3738945 3741679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0440 1 366 PP2C-type Phosphatase Gene Family AT3G12620 66.125 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0440 K01102 - gmx:100819870 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0148 4 1255714 1258267 Apr8g0440 8 3738945 3741679 PCT