Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0424 ATGAGAATCTTTCGCTTCGAGCCGAAAACGCCGTCGTTTTCCTTTTCCCCCCACACTTCGTCACCCTCCGTTTCAAGTTCAACCGCAACACCTTCCACCAGCACGGACGAGAGCATCGACGCAGCGGAAGCGCTTATTCTAAAATGGAACCCCGAAACCTCCGCGTACGCCAGAGTCACCTCTCTCTTCTACTACGATAAAACAGAGGCCATGCACTACATCCACTGCGTTAACCACCTCCATAAAACCATGCACTCTTTGCTCGAACAAAACCCGTCCTCAAGAAAACTCATCCACGCACAAAACCTTATGCAAATGGCAATGAAGAGGCTTCAGAAAGAGTTCTACCAGATTTTATCCACTAACCGGGCCCACCTCGACCCCGAATCTATCTCCACCAGATCTTCTCGCACTTCTTTCTGTTCAAACAGTTACGATGACGCCACCCCGGAAGAAGATGTTCACGAAGCAGGGGATTCCCTCTCCGAAGTCGAACGCGTTTCTTCCGAGGCCATGGCGGATCTAAAATCCATCGCTGACTGCATGGTTGCCAACGGTTACGCCAAAGAATGCGTGCTCGTTTACACCACCATGAGAAAATCGATCATCGACGAAGGCATTTATCGTCTCAACGTGGAGGAGTTGAGCTCCTCCAAGGTGAACAAAATGGACTGGGAAGTTCTTGAGCTGAAAATCAAGAGTTGGTTAGAGGCGGTTAAGATTTCTGTTAGGACGCTCTTCGCTGGAGAGAGGATCCTCTGCGATCACGTCTTCGGTGCTTCACATTCCATCAGAGAAGCTTGCTTCTCCGAGATTTCCAGAAACGGAGCTACTATCCTTTTCGGATTCCCCGAACTCGTCGACAAAACGAAGAAATCACCGCCGGAGAAGATCTTCCGCTTGATTGATATGTACGCAGCAATCGCCGCGTTATGGCCGGAGATTGAATCAATCTTCTCGTTCGACTCAACCGCCGCTATGAAATCTCAAGCCTCCGCGTTGCTTCTCCGACTCGCTGAGTCTGTACGAACGATTATCTCGGAATTCGAGACTGTGATTCAGAAAGACTCTTCCAAATCGCCTGCGAGTTTCGGCGGTGTCCATTCTCTTACGACGCAAGTGATGAATCACCTATCGATTCTCGCGGATTACAGCAACGTGCTCTCTGAGATTTTCTTGGACGTGCCTCCGCCGCCGAACACGCCGCTGCCGGAACCTTACTTGTACAGTCCAGAATCCAACGACCCGACGGCGACGGCGTTCTCGGTGCGGATGGAGTGGCTGATTCTGGTCCTCCTTTGCAAGATTGATAGTAAATCGAGGCATTGCAGGGACGTATCGTTTTCTTATCTGTTTCTCGCAAACAATCTCCGGCACGTGGTGGCCAAGGTACGCAGGTCGAACTTGCATTACGTACTCGGCGACGATTGGGTGTTGAAGCACGAAGCTAAGGTGAAGCGGTTAATAGCGAACTACAAGAGAGTAGCGTGGGACAATGTTCTTTCGACCTTGCCGGAGAATCCAGCGGCGGTTACGTCGCCGGCGGAAGCGAGAGTGGTGTTCGGGAACTTCAGTTTTGAATTTGAAAGTGCTTATCGGAAACAAAACACATGCATCGTGCCGGAAGATGAGTTTCGAGAAGAAATAAAGGCGTCTATCGCGAGAAAAATAACCCCGATTTATCGCGAGGTGTATGAAACGCACCGCATTGTAGTGGGATCGGTGAGGGAAATGAGAGAATATGTCACATTTACCCCCAAAGATGTTGAGAATTACCTGTTAAATCTCTTTTTGGAAAGAGCAAACTCTGGTACTGGAGGAAACAATTCTTTTTTTGTAAGGAAAAAATAG 1851 0.4938 MRIFRFEPKTPSFSFSPHTSSPSVSSSTATPSTSTDESIDAAEALILKWNPETSAYARVTSLFYYDKTEAMHYIHCVNHLHKTMHSLLEQNPSSRKLIHAQNLMQMAMKRLQKEFYQILSTNRAHLDPESISTRSSRTSFCSNSYDDATPEEDVHEAGDSLSEVERVSSEAMADLKSIADCMVANGYAKECVLVYTTMRKSIIDEGIYRLNVEELSSSKVNKMDWEVLELKIKSWLEAVKISVRTLFAGERILCDHVFGASHSIREACFSEISRNGATILFGFPELVDKTKKSPPEKIFRLIDMYAAIAALWPEIESIFSFDSTAAMKSQASALLLRLAESVRTIISEFETVIQKDSSKSPASFGGVHSLTTQVMNHLSILADYSNVLSEIFLDVPPPPNTPLPEPYLYSPESNDPTATAFSVRMEWLILVLLCKIDSKSRHCRDVSFSYLFLANNLRHVVAKVRRSNLHYVLGDDWVLKHEAKVKRLIANYKRVAWDNVLSTLPENPAAVTSPAEARVVFGNFSFEFESAYRKQNTCIVPEDEFREEIKASIARKITPIYREVYETHRIVVGSVREMREYVTFTPKDVENYLLNLFLERANSGTGGNNSFFVRKK* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0424 616 SUPERFAMILY Cullin repeat-like 38 597 IPR016159 -
Apr8g0424 616 MobiDBLite consensus disorder prediction 1 36 - -
Apr8g0424 616 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 603 IPR004140 GO:0000145|GO:0006887
Apr8g0424 616 Gene3D Exocyst complex component Exo70 60 604 - -
Apr8g0424 616 Pfam Exo70 exocyst complex subunit 233 594 IPR046364 GO:0000145|GO:0005546|GO:0006887
Apr8g0424 616 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 603 - -
Apr8g0424 616 MobiDBLite consensus disorder prediction 12 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0424 Apr-Chr8 3622150 3624000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0424 39 601 EXO70 exocyst subunit family AT3G09520 54.386 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0424 K07195 - gmx:100798477 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0424 8 3622150 3624000 Apr4g0136 4 1170614 1172976 PCT