Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g0416 | ATGGTAGCCATTTTGAAGAGACAAAGAGAGAACCAAGAAAAAGAGAGCATAGATTTGGCCAATAGTTTGATGCTACTCTCTCGTGTTCAACAAAGCAAACCCTTAATGAAAAGTTATGCTCCAATGGAGTTTGAGTGCAAGACGTGTAACCGCAAGTTCTCATCATTTCAAGCCCTTGGTGGCCATAGGGCTAGCCACAAGAAGCCCAAGTTTGATGGAGAAGATCTAAGAGCTGAGGCCAAGGCTCTTAGCTTGTGGAATAAGCCCAAAATGCATGAGTGTTCCATTTGTGGCATGGAATTCTCTCTGGGTCAGGCACTAGGAGGACACATGAGGAAGCATAGGGGTGCCATCAATGAAGGGTTTTCTTCTATAACCCATGCTATTGAGAAAGCCCCGGTTCTCAAAAGATCGAATAGCAAAAGGGTTATGAGCTTGGACTTGAACTTGACTCCTTTGGAAAATGACTTGCAATTGTTGTTTGGAAAGAAGGCACCTCAAGTTGATCTTTCTTTATTTGTTATTATTGATTTGTTGAATTTAGGGGACGATTCGCAAATAGCTATTCAACTGTGGTTTGGTGAATTTGTGACTTCGTTCGTAGCCATGAAGAGACCGAGAGATGAAGGAGTAAACAGCATAGATTTGGCAAATTGTTTAATCCTGCTCTCTCATCCCAGCAGAGAAAGCAAACCCAAGAAACGTTTAGGCCCTGAAGAATTTAAGTGTAGCACATGTAACCGTAAGTTCTCTTCATTTCAAGCCCTTGGTGGCCACAGAGCTAGCCACAAGAAGCCCAAACTAGAGGGGAAAGAACTCAAAGAACAAGACAAAGCTCTTCTGAGCTTATGGAATAAGCCCAAAACCCACGAGTGTTCCATTTGTGGTTTGGAATTCGCTCTGGGCCAGGCACTGGGTGGACACATGAGAAAGCACAGAATTGTTGCCAACGAAGGGTTTTCTTCTATAAACCAGGTTGTTGCTAAAGTCCCAGTTATGAAAAGGTCCAATAGTATGAGGTTTATGTTCTTGGACTTGAACTTAACTCCTCTGCAGAATGACTTGAAGTTATTGTTTGGAAACATGGCACCCAAAGTCGATTCCTTCGTCTGA | 1113 | 0.4295 | MVAILKRQRENQEKESIDLANSLMLLSRVQQSKPLMKSYAPMEFECKTCNRKFSSFQALGGHRASHKKPKFDGEDLRAEAKALSLWNKPKMHECSICGMEFSLGQALGGHMRKHRGAINEGFSSITHAIEKAPVLKRSNSKRVMSLDLNLTPLENDLQLLFGKKAPQVDLSLFVIIDLLNLGDDSQIAIQLWFGEFVTSFVAMKRPRDEGVNSIDLANCLILLSHPSRESKPKKRLGPEEFKCSTCNRKFSSFQALGGHRASHKKPKLEGKELKEQDKALLSLWNKPKTHECSICGLEFALGQALGGHMRKHRIVANEGFSSINQVVAKVPVMKRSNSMRFMFLDLNLTPLQNDLKLLFGNMAPKVDSFV* | 371 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g0416 | 370 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 44 | 71 | IPR013087 | - | |
Apr8g0416 | 370 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 203 | 365 | - | - | |
Apr8g0416 | 370 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 5 | 167 | - | - | |
Apr8g0416 | 370 | SMART | c2h2final6 | 290 | 312 | IPR013087 | - | |
Apr8g0416 | 370 | SMART | c2h2final6 | 241 | 263 | IPR013087 | - | |
Apr8g0416 | 370 | SMART | c2h2final6 | 44 | 66 | IPR013087 | - | |
Apr8g0416 | 370 | SMART | c2h2final6 | 92 | 114 | IPR013087 | - | |
Apr8g0416 | 370 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 92 | 119 | IPR013087 | - | |
Apr8g0416 | 370 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 94 | 114 | IPR013087 | - | |
Apr8g0416 | 370 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN | 203 | 365 | - | - | |
Apr8g0416 | 370 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN | 5 | 167 | - | - | |
Apr8g0416 | 370 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 46 | 66 | IPR013087 | - | |
Apr8g0416 | 370 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 292 | 312 | IPR013087 | - | |
Apr8g0416 | 370 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 241 | 268 | IPR013087 | - | |
Apr8g0416 | 370 | SUPERFAMILY | beta-beta-alpha zinc fingers | 90 | 263 | IPR036236 | - | |
Apr8g0416 | 370 | SUPERFAMILY | beta-beta-alpha zinc fingers | 287 | 313 | IPR036236 | - | |
Apr8g0416 | 370 | Pfam | C2H2-type zinc finger | 92 | 116 | - | - | |
Apr8g0416 | 370 | Pfam | C2H2-type zinc finger | 44 | 69 | - | - | |
Apr8g0416 | 370 | Pfam | C2H2-type zinc finger | 241 | 266 | - | - | |
Apr8g0416 | 370 | Pfam | C2H2-type zinc finger | 290 | 314 | - | - | |
Apr8g0416 | 370 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 243 | 263 | IPR013087 | - | |
Apr8g0416 | 370 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 290 | 312 | IPR013087 | - | |
Apr8g0416 | 370 | Gene3D | Classic Zinc Finger | 42 | 114 | - | - | |
Apr8g0416 | 370 | Gene3D | Classic Zinc Finger | 239 | 312 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g0416 | Apr-Chr8 | 3542186 | 3547761 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g0416 | 203 | 367 | C2H2 Transcription Factor Family | AT2G37430 | 45.556 | 9.92e-41 | 140 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Apr8g0416 | zf-C2H2_6 | 7.9e-09 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g0416 | - | - | aprc:113870747 | 737.643 |