Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0414 ATGTCTTTCCACAATCAAGCATTTTGGACGGGGAAGAGCCCTGGGTGTTTGGACGATGGTGACCCGACCTATGATAATTCTTCTAGAGTTGAGTCCAAGCGTACTCAGCAGTGGTTCATGGATTTCCCTGAAGTGGATCCCTTTCCCAATAAGAAACAAGCAGTAGAGGCCCCAAACAATTTATTATCTGGAATGATCAACTCCAACATTTCTTCGTGGGGAAATTCCTCAGGTTTTCACTCTTTGACAGGTCAATTTACTGAACAACTGTTTGACCCAAATGCAGCAACTATGAATTTTGCAGATGCTAATGTTTCCTCCGTTAGCATAGATAATAAGTTGAGTGTGGAAAGCAAGGATAACATGGATCCCTTTAGGAGTGAATCCTCATTTGGTTTATCCATGTCATCTACATTAGAAGATCCTCGATTAGTCTTTAATTATGATGGAATTAGAAAAGTCAAAGTTAATGAGGTGAAGGAATCTGAGAATGTCATGTCTGTTACTACAAATAATCCCTATGATAGGGGAGCTAACAAAAATTTGTCAAATCCTCTTGCATATAAGGGGGGTGATAATCCCATGTCAATGAGTCTCTCCTACAACAAAGGGGTTGCCAATATAATATCAATGGATGGTGCATATGACAGGACAAATAACAGTTTAATGTCAATAGGTCAAACGTATAACAAAGGAAATGACAGTTTATCTATACATCCGACATATAAAGAGATTTGTAATACAATATCAATAGATCAGAGTTTCAATAAGGTGGATTGCAATGCCATATCTATTGCTCAAGCATACAACAAGGCCCATGACAATTCTGTGTTAACTAACCACATATTCAATAAGGTTGATGATGACACCACATCAATGGGTCATGCTTACCCCAGGGAGGGAAATGATGTGCCATTTGTTTCTCATTCATATACTAAAGGAGAGAGCACCATCATCTCCTTTGGTGGCTGTGATGATGATGATACAACTCCCTCTGACTTATTCATTTCCAACTATGAACTGTTGATGTGTCAAGCACCTTCACATAAGTCAGAAGCTATGAATGAGAAAGAGTTGGGTAGATCCAGTTCTAATTTACTTCCTAGTACAGGTCAGACATCTGCATCTGAAACTGAAAATCTTCCCAAGACAAAAGATGAGACAAAAATGTCCAAAAAAGCTACTTCAAACAACTTCCCTTCAAATGTCAGAAGTTTGCTATCCACTGGAATGCTGGATGGTGTCTCAGTAAAGTATAAGGCCTGGTCACGGGAGGAACTTCGAGGTGTTATACAGGGCGCTGGGTACTTGTGCAGTTGTCAGTCGTGTAATTCTTCCAAGGTTATTAATGCATATGAGTTTGAACGACACGCTGGTTGCAAGACAAAACACCCCAATAATCATATTTACTTTGAGAATGGGAAAACTATATATGGGGTTGTACAAGAGCTCAGAAGCACTCCACAGAGTATGTTGTTTGAAGTTATTCAGACTATAACCGGTTCGCCTATCAATCAAAAATCGTTCCGCATTTGGAAAGAATCTTTTTTGGCTGCAGCACGGGAACTCCAGCGCATATGTGGAAAACAAGAAGCAAAGCAATTGTTATAA 1611 0.3954 MSFHNQAFWTGKSPGCLDDGDPTYDNSSRVESKRTQQWFMDFPEVDPFPNKKQAVEAPNNLLSGMINSNISSWGNSSGFHSLTGQFTEQLFDPNAATMNFADANVSSVSIDNKLSVESKDNMDPFRSESSFGLSMSSTLEDPRLVFNYDGIRKVKVNEVKESENVMSVTTNNPYDRGANKNLSNPLAYKGGDNPMSMSLSYNKGVANIISMDGAYDRTNNSLMSIGQTYNKGNDSLSIHPTYKEICNTISIDQSFNKVDCNAISIAQAYNKAHDNSVLTNHIFNKVDDDTTSMGHAYPREGNDVPFVSHSYTKGESTIISFGGCDDDDTTPSDLFISNYELLMCQAPSHKSEAMNEKELGRSSSNLLPSTGQTSASETENLPKTKDETKMSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREELRGVIQGAGYLCSCQSCNSSKVINAYEFERHAGCKTKHPNNHIYFENGKTIYGVVQELRSTPQSMLFEVIQTITGSPINQKSFRIWKESFLAAARELQRICGKQEAKQLL* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0414 536 PANTHER PROTEIN, PUTATIVE-RELATED 5 534 - -
Apr8g0414 536 MobiDBLite consensus disorder prediction 352 397 - -
Apr8g0414 536 MobiDBLite consensus disorder prediction 358 379 - -
Apr8g0414 536 PANTHER AUTOIMMUNE REGULATOR 5 534 - -
Apr8g0414 536 Pfam Tify domain binding domain 429 484 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0414 Apr-Chr8 3522384 3526085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0414 388 516 PHD Transcription Factor Family AT3G53680 56.923 6.79e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0414 - - gmx:100794765 774.622