Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0413 ATGGAGAACCACCATGAGACACAAAATTGGTTCGAAAGAGCGAAGCCATTCGTAGCTGTGGTATCTATCCAGCTTGGATATGCGTGTATGGATGTTTTATCCAAGGCTGCAATGAACAAAGGAATGAGCAATTATGTATTTGTCGTTTATCGCCATGCTGTTGCATTCTTTGTCATAGCTCCTTTCGCATGGTTTTTTGACAAGAAAGTAAGGCCAAAGATGACATTATCAATTTTCATGAAGATAGCGGTGCTCAGTTTGCTAGAGCCAGTTATTGACCAGAATTTGTATTTCTTGGGGATGAAGTACACTACAGCAACCTTTGCAGCTACCATGACCAATATCCTTCCTGCCATTACCTTTATTTTGGCATTTATTCTTAGGCTTGAGAAGATAAAAATAAAAAGTATACGTAGCCAAGCAAAGGTGGTGGGAACTCTAGCAACTGTTTCTGGTGCCATGGTCATGACATTGATGAAAGGTCCAGTACTTTTTGGGTCACACCGAAGCAATGAACACAGCCAGCATAACGGGACAAATACTCAACATACAATACTGGGATCCGTGATTATCACAATTGGATGCTTCAGTTGGGCTTGTTTCGTGATCCTACAAGCCATTACCCTTAAAACCTATCCTGCTGCGCTCTCTCTTTCCGCATGGATATGCCTATTGGGCACAATTGAAGGGGCAGCTGTGGCTATGGTTATGGAAAGGGGCAACCTTTCAGTTTGGTCTCTAAAATGGGATTTGAAGCTGCTCTGTGCTGTTTACACTGGCATAGTCTGCTCTGGACTGAGTTATTACTTGCAAGGAGTAGTGATGAAAACTAGAGGCCCAGTCTTCGTAACAGCATTTAATCCCCTCTGCATGGTTAATGTGGCTATCATGAGCTTCTTCATTCTGGCTGAGCAAGTGTTCCTTGGAAGGCTGATCGGCGCCGTTATTATTTGTTTGGGCCTGTATGTTGTGGTGTGGGGTAAAAGCAAAGATTATAGCCCACCAAGTCCAATTATTCAAGAGCCCATATTGCCAGCCAAGGGCAATGCTAGGAAGGAACATTGCACTCACGAGGTCACCACCGTCACTAATTTTGAATCAGGAATCGCAACTCGAGAAGAACAAGTATGA 1131 0.435 MENHHETQNWFERAKPFVAVVSIQLGYACMDVLSKAAMNKGMSNYVFVVYRHAVAFFVIAPFAWFFDKKVRPKMTLSIFMKIAVLSLLEPVIDQNLYFLGMKYTTATFAATMTNILPAITFILAFILRLEKIKIKSIRSQAKVVGTLATVSGAMVMTLMKGPVLFGSHRSNEHSQHNGTNTQHTILGSVIITIGCFSWACFVILQAITLKTYPAALSLSAWICLLGTIEGAAVAMVMERGNLSVWSLKWDLKLLCAVYTGIVCSGLSYYLQGVVMKTRGPVFVTAFNPLCMVNVAIMSFFILAEQVFLGRLIGAVIICLGLYVVVWGKSKDYSPPSPIIQEPILPAKGNARKEHCTHEVTTVTNFESGIATREEQV* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0413 376 Pfam EamA-like transporter family 25 137 IPR000620 GO:0016020|GO:0016021
Apr8g0413 376 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Apr8g0413 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 329 - -
Apr8g0413 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 156 - -
Apr8g0413 376 PANTHER WAT1-RELATED PROTEIN 10 352 IPR030184 GO:0016021|GO:0022857
Apr8g0413 376 PANTHER WAT1-RELATED PROTEIN 10 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0413 Apr-Chr8 3517984 3522183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0413 6 364 Nodulin-like Gene Family AT2G37460 63.388 6.59e-169 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0413 - - gmx:100811147 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0124 4 1074140 1077921 Apr8g0413 8 3517984 3522183 PCT