Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0389 ATGCACATGCTCATAGACAAAGAAATGTCCAAACAAAAAGACCCCAAGCACAACCTACCAAATGTAGTTGCAAAACTAATGGGGCTTGAAACCCTTCCAAGGAGAGAGCCTAATCTATCTGTGGAGAGAAGCCATAGAAAAGATTATTCTCAACATATGTATGGTCCTATAGGGTTACCATTCCATCATGGGCAGCTTGAAGATAGGTGTATGGATAAGGAAATTCTTCATGAAGTTCATCCAAGCACAGAACAAGTTGCTTACAATGATATCTATGAACAGTGGCAGCAATCTCCAACAAACCATTTAAGAGGCAAGTTACCAGATAGAAGAAGGTGGAGTGCAGATGTTGATGGGGAAAAAATGGCTTTCATTCGTCAGAAATTCATGGAAGCAAAGCATTTGTCTACAGATGAGAGATTGCGCCACTCCAAACAATTTGAAGATGCCTTGGAAGTTTTAAGCTCCAATACTGATCTCTTAATCAGGTTATTGGATTCTCAAAATCTTTATGAAGTTTACTCTACTCCACCAGCTGAGACAAGGCACATTACTCTGATTAAACCTTCCAAGATGGTTGACAATGACAAATCTGCTAGAAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATAGACTGATTAAAAATCCAGAAAATGTTAATCAAACAGCTGTATTGAAGAACAAGAATCCTATGAACTCTCCAGAAAGTCAGAAAGTTGATGAGTTTCCAGTTCAAACTACTCGAATAGTGTTACTGAAGCCTAGCCCTGGGAGGACACATGAGCAAAAGGCTGTGATTTCTCCAATAAATTCATCACCACTAAATCTGAAAAGTGGAAATTTCTATCAGGGACCTGAATATGATGATGCACTAGAATCCGCAAAAGTGGCAAAAGAGGTCACACAGCCAAAGCATGAAGGCCTGAGGAGCTACCAAAAGGATAAAACTTCATATTCTTCAGTGTTTTCCAATGGCTATTCTGATGATGAGAGTTCATTTAACAAATCATATCATGAGTATACATTTGGGAATTTTGGTGATTTGCAAGCTATGTCACCATTGCCGAGGCTTTCATGGGATTACACCAATGGCTGTGGTAGTCCTTATTCTACAATGTCGTTGGGTCGTGCATCGTGCTCTCCTGAGTCATCAGTGTGCAGAGAGGCAAAGAAAAGGCTTTCTGAAAGATGGACCATGATGACATCAGATAATAAGGGTCATCAAGAACAAAGGCATATAAGGAGAAACTCTACCTTGGGTGAGATGCTTTCTCTTTCCCATATAAAGAAATCTGTAACATCTGCATTTGAGAGTACTAATGAAGACCACGAACCTGGCAAATCTGTTTCTTGCACTCATTCTTTCAATGAACAAATAAGAATTGATGGTTCTCCTAAGAATCTTCCCAGGTCAAATTCTGTGCCTGCATCTTCTACTGTCTATGAAAATGATCAGGATGCTGGCAAAGCACATGGCTCAAAGGTTCATACAAAGTCAAAGAGTTTGAAATCATCATTTAAAGGGAAAGTTGCCAGTTTCTTGTTCTCAAGGAGTAAGAAATCAACCAAGGAAAAATCTAGTCCATCTCAATCTAAAGATGAATCCCAATCTACTGTCACTGAAACATCAGTTCTTGAAGCACATTCACATGGAATCCTTAGGGATGATATGTCTCAAAGCTTCAGTGTTGATGGTTTTGAAGAGTGTTCTCTTGCAGCACTATATGAATCATCAGGGAAAACTATAACAGATTCAGTCTCCAACAGACAAGAGCAAGGCATAATTACACTTGAGCCTGAATTGACTATGCCAAAGCCAATGGTGCCAGAGATTTCAAGCGAAAATCAGCCTAGTCCAATCTCAGTATTACAACCTCCATTTGAAGATTATAATAATGCTTCTCATGAGTCCTTGGACTCTATGAAGGGTGGACACCTGGGATCACCGCTGCCTCTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAATATCAAGGACCCTTTCATGGGATGATTCTTGTGCAGAATTAGCAAGCCCGTATCCATTAAAACCCCCGATGGTTTCTTCCTTAGACTCAAAGGTAGAGGAACAAGAGTGGCTTCTCTTGGTCCACAAACTACTATCAGCAAGTGGACTTGATGATCAACAACAATATGACTCGTTTCATACAACGTGGTATTCTCTTGAAAGACCATTAGACCCATCATTGAGGGACACTTATGCCAATTTAAATGACAAGGAGCCTCAACCTTTGCATGAGGGCAGAAGAAGGAAGATGAGATCAAATCAGAAGCTTGTGTTTGACTGTGTGAATGCTGCACTATTGGAAATTATTGGTTATGGATCAGAGAGTAGCTTTAAGAGGAGGATGTACAGTGGGAGCCACAGAGTCCAAAAGGGTGTATCACCCTTATTGGTGGACCACATTGTGGCCCAAATGAAGAAATTAATAGCAAGTGGGATGAGATGTGAATGGGAGGATGGTGGGGGCAGTAACAGCCTGGTGGTAGAAAATGTTGTCAGAGAAGAGGTTGTCCAAATAGGGTGGCTTGAGCTTATAGAATTGGAGATTGATATTTTGGGAAAGGAAATAGAGGGAGAGTTGATACAAGAGCTTGTGGAGAATGCTGTGATTGATTTTACAGGCAGGGCCTGA 2679 0.4046 MHMLIDKEMSKQKDPKHNLPNVVAKLMGLETLPRREPNLSVERSHRKDYSQHMYGPIGLPFHHGQLEDRCMDKEILHEVHPSTEQVAYNDIYEQWQQSPTNHLRGKLPDRRRWSADVDGEKMAFIRQKFMEAKHLSTDERLRHSKQFEDALEVLSSNTDLLIRLLDSQNLYEVYSTPPAETRHITLIKPSKMVDNDKSARKEKKKKKKKKKKKKNRLIKNPENVNQTAVLKNKNPMNSPESQKVDEFPVQTTRIVLLKPSPGRTHEQKAVISPINSSPLNLKSGNFYQGPEYDDALESAKVAKEVTQPKHEGLRSYQKDKTSYSSVFSNGYSDDESSFNKSYHEYTFGNFGDLQAMSPLPRLSWDYTNGCGSPYSTMSLGRASCSPESSVCREAKKRLSERWTMMTSDNKGHQEQRHIRRNSTLGEMLSLSHIKKSVTSAFESTNEDHEPGKSVSCTHSFNEQIRIDGSPKNLPRSNSVPASSTVYENDQDAGKAHGSKVHTKSKSLKSSFKGKVASFLFSRSKKSTKEKSSPSQSKDESQSTVTETSVLEAHSHGILRDDMSQSFSVDGFEECSLAALYESSGKTITDSVSNRQEQGIITLEPELTMPKPMVPEISSENQPSPISVLQPPFEDYNNASHESLDSMKGGHLGSPLPLKSNLIDKSPPIESISRTLSWDDSCAELASPYPLKPPMVSSLDSKVEEQEWLLLVHKLLSASGLDDQQQYDSFHTTWYSLERPLDPSLRDTYANLNDKEPQPLHEGRRRKMRSNQKLVFDCVNAALLEIIGYGSESSFKRRMYSGSHRVQKGVSPLLVDHIVAQMKKLIASGMRCEWEDGGGSNSLVVENVVREEVVQIGWLELIELEIDILGKEIEGELIQELVENAVIDFTGRA* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0389 892 Coils Coil 200 220 - -
Apr8g0389 892 MobiDBLite consensus disorder prediction 465 506 - -
Apr8g0389 892 Pfam DUF761-associated sequence motif 20 33 IPR032795 -
Apr8g0389 892 MobiDBLite consensus disorder prediction 201 217 - -
Apr8g0389 892 MobiDBLite consensus disorder prediction 465 489 - -
Apr8g0389 892 Pfam Domain of unknown function (DUF4378) 711 882 IPR025486 -
Apr8g0389 892 MobiDBLite consensus disorder prediction 522 547 - -
Apr8g0389 892 Pfam Protein of unknown function (DUF3741) 126 169 IPR022212 -
Apr8g0389 892 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 891 - -
Apr8g0389 892 MobiDBLite consensus disorder prediction 188 226 - -
Apr8g0389 892 PANTHER DUF3741 FAMILY PROTEIN 1 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0389 Apr-Chr8 3294518 3299789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0389 1 889 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 37.582 4.99e-137 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0389 - - gmx:100787955 1213.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0389 8 3294518 3299789 Apr8g0389 8 3294518 3299789 ECH
Apr4g0095 4 850463 857226 Apr8g0389 8 3294518 3299789 PCT