Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0384 ATGGAGAACTTGTTAGGCCTGGTTGACCATGAGGACTTGTTCTCAAAGCGTTGCATTTGGGTCAACGGTCCTGTGATCGTAGGGGCAGGTCCATCAGGGCTAGCCACAGCAGCATGCCTTAGAGAACAAGGGGTACCCTTCATGGTTCTAGAAAGAGCAAATTGCATAGCCTCTCTATGGCAAAAACGCACCTATGACAGGTTAAAGCTTCACCTTCCTAAACAGTTTTGCCAACTACCAAAGCTTCCATTTCCAGAAGACTTCCCTGAATACCCAACAAAGAAACAGTTCATAGACTACCTCGAATCCTATGCAAGACACTTCGAGATCAACCCACGATTCAATGAGTGTGTTCAGTGTGCAAGGTACGATGAAACCAGTGGATTGTGGAGGGTTAAGACCGTTTCTTCAAATGGGTCCACTAGAAACGAGTTTGAGTACATTTGTAGGTGGCTCGTTGTGGCCACTGGTGAGAATGCTGAGTGTGTGATGCCTGATATTGAAGGATTGGGTGAATTCAAAGGTGATGTCATTCATGCTTGTGATTACAAGTCTGGGGAAAGATTCAAGGGAAAGAAAGTTCTTGTTGTTGGTTGTGGCAATTCTGGCATGGAACTCTCACTTGATTTGTGTAACCACAGTGCATTACCCTCTATGGTTGTTCGTAGCTCGGTTCATGTGTTGCCTAGAGAGATTTATGGGAAGTCAACATTTGAATTGGCTGTTTTGATGATGCAATGGTTGCCACTTTGGGTGGTTGACAAGATCCTATTGGTGTTGGCATGGATAGTGTTGGGTAACATTGAGAAGTCTGGGCTCAAAAGGCCATTAGAGGGTCCATTGGAGTTGAAGAACTCAAAGGGTAAGACCCCTGTTTTGGACATTGGTGCCTTGGAGAAAATTAGATCCGGTGACATAAAAGTGGTGCCGGGAATTAAGAGGTTCACCAATTGCTGCGTTGAGCTGGTTAATGGTCAAAAGCAAGACGTTGAGGCAGTAGTGCTTGCAACTGGGTACCGCAGCAATGTCCCTTCTTGGCTTCAGGAAGGGGAATTTTTCTCCAAGAATGGATTTCCAAAGTCACCATTCCCTAATGCTTGGAAAGGAAATGCTGGGATTTATGCTGTTGGGTTCACAAGGAGAGGGCTCTCTGGTGCCTCATCTGATGCTATGAAAATTGCTCAAGATATTGGCCAAGTCTGGAAACAAGAGACTAAGCAAAAGAAACAACGGACCAATGCTTGTCATAGACGTTGCATTTCCCAGTTCTGA 1272 0.4528 MENLLGLVDHEDLFSKRCIWVNGPVIVGAGPSGLATAACLREQGVPFMVLERANCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPEDFPEYPTKKQFIDYLESYARHFEINPRFNECVQCARYDETSGLWRVKTVSSNGSTRNEFEYICRWLVVATGENAECVMPDIEGLGEFKGDVIHACDYKSGERFKGKKVLVVGCGNSGMELSLDLCNHSALPSMVVRSSVHVLPREIYGKSTFELAVLMMQWLPLWVVDKILLVLAWIVLGNIEKSGLKRPLEGPLELKNSKGKTPVLDIGALEKIRSGDIKVVPGIKRFTNCCVELVNGQKQDVEAVVLATGYRSNVPSWLQEGEFFSKNGFPKSPFPNAWKGNAGIYAVGFTRRGLSGASSDAMKIAQDIGQVWKQETKQKKQRTNACHRRCISQF* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0384 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Apr8g0384 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 189 213 - -
Apr8g0384 423 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 10 421 - -
Apr8g0384 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Apr8g0384 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 193 211 - -
Apr8g0384 423 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 186 359 IPR036291 -
Apr8g0384 423 SUPERFAMILY FAD/NAD(P)-binding domain 25 248 IPR036188 -
Apr8g0384 423 Gene3D - 23 409 IPR036188 -
Apr8g0384 423 Pfam Flavin-binding monooxygenase-like 26 344 IPR020946 GO:0004499|GO:0050660|GO:0050661
Apr8g0384 423 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0384 Apr-Chr8 3260417 3264571 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0384 K11816 - gmx:100807325 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0384 8 3260417 3264571 Apr8g0384 8 3260417 3264571 ECH
Apr8g0384 8 3260417 3264571 Apr4g0093 4 833211 834978 PCT