Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0382 ATGGAGGAAAAAACCAAGAAGAAAAGGTCTAAGATTGACCTAAGTGATTTGGGAAGTAGTTTTGATTTGGATTCAAGTAAAAGAAAGAAAAAGGAGCCCAAGGAGAGGGAGAAAAAGCATGCAACTGACAAAATACTCAAGTCAAATGAATCCCTCGAGGAAGATTGTACTGTTGAAGCAGCTGACAAACAAACTTGCTCTGTTGAAGGGAATGTCACACTCATGTGTAATGAGGAAGAAAAGAGCCCTGAAAATAAGAGTAAGAAGAAAAAAGAGAGAAAAGGTGTTGAGGTAACAAATAGTAACATTGCTGATAATCAAGAAGTGCAGGTCTTGGATGTCAACCAGGAAAGCAAGATGAAGAAAAGAAAAAAAATTGATTATTCATTAAATGGAATGCAAGAATTGATTTTTTCAAAACCAAGCAAAAGAAGTAAAATGACAGAAGATAATGAGTTAGAAGGCAACGAAGGTGAAGATGATGACCAAGGCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACTGTGTGAACAAAGCAAAAGGAAGGAGCATGGTGAGTTCAATAGCAATGAAGGTGATTCACCTTTGACTAGAGTTGAGTCAAGAGATGATAATGCAGGTTTCATTGACACTGATGTTGATGATCAAAGCAAAGAGATGAAGATAAAGAAGAAAGTTGAGGCGGATACTGCTGAATCAACTAACCCTGGTTCATCTAAACGCAAACGGGTAACTTTTTCTGATAAAGTGGATGTTTGTTGTGATGGCTTAGTGCGTGGGAAAAGGTTTACGCCAAAAGAAGATGAGAAGATTAAATTGGCTGTTTATGACTATATAGAGTCTCATGGTTTGGGAGACGAAGGTCTAGACATGATTCTCCATTGCCAATCTCATCCTGAAGTTAAAGATTGTTGGAAGGAAATTGGAGCAGCCTTACCTCAGAGGCCTATGTATAGTGTGTATTATCGGGCTCATATTTTGTTTGAAAGAGATGAGAAGCGTAAGTGGACACCTGAAGAGCTTGAATTTTTACGGAAGGTCCAGGAACAACATGGATCTGATTGGAAATCAGTAGCTGAAGCATTGGGTAAACATCGATTTCATGTAAAGGATGCATGGCGCAGAATAAAATTAACAAATACAAATAAAGGGCGATGGACCCAAGAGGAATATCAAAAATTATTTGATTTAGTAAACCTGGATCTACGTGCGAGAGCTTCAGATGGTTATAGAAAATCAAAACATGGTATGTTGCGAGATAATATTGGTTGGGAGGCAATTGGTGATAAATTGGCCACTAGAAGTAGTGCACGCTGCTGCAAAAAGTGGTATGAGCAATTAACGTCACCTATGGTTGCTAGTGGTGCGTGGAGTGATACTGATGACTATCGTCTGATTAGTGCTTTATTTACTCTGGATCCTTGCACCATGGCAGAGGTAGATTGGGACAATCTGCTTGAGCATAGGCCTGGTGATGTATGTAGAAAACGATGGAACCAAATGGTTCAATTTATTGGACAGCATGGGGGGAAGCCATTTGGTGAGCAGGTTGAAATTCTTGCAAAAAGATTTTGCCCTGACTTATTGGAAGTGAGGGAGGCCTTTGATGAAAAACCTCTGCGATGTTGA 1632 0.3928 MEEKTKKKRSKIDLSDLGSSFDLDSSKRKKKEPKEREKKHATDKILKSNESLEEDCTVEAADKQTCSVEGNVTLMCNEEEKSPENKSKKKKERKGVEVTNSNIADNQEVQVLDVNQESKMKKRKKIDYSLNGMQELIFSKPSKRSKMTEDNELEGNEGEDDDQGKKKKKKKKKKKLCEQSKRKEHGEFNSNEGDSPLTRVESRDDNAGFIDTDVDDQSKEMKIKKKVEADTAESTNPGSSKRKRVTFSDKVDVCCDGLVRGKRFTPKEDEKIKLAVYDYIESHGLGDEGLDMILHCQSHPEVKDCWKEIGAALPQRPMYSVYYRAHILFERDEKRKWTPEELEFLRKVQEQHGSDWKSVAEALGKHRFHVKDAWRRIKLTNTNKGRWTQEEYQKLFDLVNLDLRARASDGYRKSKHGMLRDNIGWEAIGDKLATRSSARCCKKWYEQLTSPMVASGAWSDTDDYRLISALFTLDPCTMAEVDWDNLLEHRPGDVCRKRWNQMVQFIGQHGGKPFGEQVEILAKRFCPDLLEVREAFDEKPLRC* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0382 543 CDD SANT 386 446 IPR001005 -
Apr8g0382 543 PANTHER GB|AAC33480.1 13 541 - -
Apr8g0382 543 MobiDBLite consensus disorder prediction 1 62 - -
Apr8g0382 543 ProSiteProfiles Myb-like domain profile. 329 378 IPR001005 -
Apr8g0382 543 MobiDBLite consensus disorder prediction 1 15 - -
Apr8g0382 543 CDD SANT 336 365 IPR001005 -
Apr8g0382 543 ProSiteProfiles Myb-like domain profile. 379 448 IPR001005 -
Apr8g0382 543 SUPERFAMILY Homeodomain-like 334 395 IPR009057 -
Apr8g0382 543 ProSiteProfiles Myb-like domain profile. 450 503 IPR001005 -
Apr8g0382 543 MobiDBLite consensus disorder prediction 76 243 - -
Apr8g0382 543 SUPERFAMILY Homeodomain-like 428 505 IPR009057 -
Apr8g0382 543 Gene3D - 377 452 - -
Apr8g0382 543 MobiDBLite consensus disorder prediction 115 129 - -
Apr8g0382 543 Gene3D - 338 376 - -
Apr8g0382 543 MobiDBLite consensus disorder prediction 22 60 - -
Apr8g0382 543 MobiDBLite consensus disorder prediction 79 98 - -
Apr8g0382 543 SMART sant 383 450 IPR001005 -
Apr8g0382 543 SMART sant 333 380 IPR001005 -
Apr8g0382 543 SMART sant 454 505 IPR001005 -
Apr8g0382 543 SMART sant 260 331 IPR001005 -
Apr8g0382 543 MobiDBLite consensus disorder prediction 197 231 - -
Apr8g0382 543 MobiDBLite consensus disorder prediction 99 114 - -
Apr8g0382 543 Pfam Myb-like DNA-binding domain 337 395 - -
Apr8g0382 543 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 334 382 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0382 Apr-Chr8 3214548 3217834 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0382 331 504 MYB Transcription Factor Family AT4G32730 27.778 3.49e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr8g0382 Myb_DNA-bind_6 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0382 - - aprc:113872850 1009.98