Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0379 ATGCCATCATTGCTGCCACGTGGAAGCTTTTTTGGGAATGCTCCTCAGCCTAGTGAAAGTGTTGAAGGTATACTCCCAATCACTGCCAAGAATATCAGCAATGATGAGAAAATGGATCTTGGTACCATAATCATCATTGCTCTATCTTCCTTTGTACTCTTGGTGGTTTTGGTTGGAGCATTTTCCATCATTTTGAGATGGAGGAAAATTAGGAGATCATCAAGTGCTGTTGGCCCTGCATTCACTTCGTATCTAAACAAGAGATCTGCCATGGAGTCTATGTTTTCAAACAGAATTTCGAGCTCAAGATCTATGTCTCTTCTGTCCACCTTGGCTACTTCTGTTCTCTCTGTTAAAACATTTTCCTTTTCTGAGCTTGAGAAAGCAACAGCTCAGTTCAGTTCTCAGAGAGTATTAGGAGAAGGAGGATTTGGACGTGTTTATTGTGGGACATTTGATGATGGAACTGAAGTTGCAGTTAAGCTGCTAACAAGGGATAATCAGAATGGAGACCGTGAATTTATTGCAGAAGTTGAGATGCTAAGCCGTTTGCATCATCGTAATCTTGTGAAACTCATTGGTATATGCATAGAAGGGCGAAGGCGTTGCTTGGTCTATGAGCTTGTTCGCAATGGCAGTGTTGAGTCTCATTTGCATGGTGTTGACAAGAAAATGAGCCCTCTAGATTGGGAAGCACGGATAAAAATTGCCCTTGGAGCTGCGAGAGGATTGGCCTATCTTCACGAGGATTCTAATCCTCGTGTAATTCACCGAGATTTCAAAGCTAGCAATGTGTTGTTAGAAGATGACTTTACCCCCAAGGTTTCTGATTTTGGATTAGCAAGAGAAGCAACTGATGGAAATCGTCATATTTCTACAAGAGTCATGGGTACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTCGTTAAAAGTGATGTTTATAGTTATGGTGTTGTGCTGCTTGAACTTCTAACAGGCAGAAGACCAGTGGACATGTCTCAACCACCTGGACAGGAGAATCTTGTAACATGGGCTCGACGACTGTTGACAAGTAGAGAAGGTTTAGAACAGCTGGTGGATCCATCTTTGGCTGGAAGCTATGACTTCGATGACATGGCAAAGGTGGCTGCTATTGCTTCAATGTGTGTACACCCAGAGGTCACCCAGAGACCTTTTATGGGTGAGGTTGTGCAGGCTCTTAAGTTGATCTACAACGACACCAATGAGACCTGTGGGGACTGGAATAGTCGGAAGGAGTCTTCTGCTCAGGAGTCTGATTTTAGAGGTGACCTTGCCTTTTCTGATAGCAGTTGGAGGGATGCTGAAGGGGTGCCGCAATTAACATATGGGCAAGCACCTTCCTTCATCACTATGGAACACAGTTCTGGTCCACTTGAAGAAACTGAAACCAGACCGTTTTCAGCTTCAAACTTGATGGGAAATGAGACATTTATATCAATCAGGCACGAGAATAGATCAGGACCCTTAAGAGCAGCCCGAAGCAAGCTATCCTTTCACAGGTTTACTGGAAGTCAGTGA 1554 0.4376 MPSLLPRGSFFGNAPQPSESVEGILPITAKNISNDEKMDLGTIIIIALSSFVLLVVLVGAFSIILRWRKIRRSSSAVGPAFTSYLNKRSAMESMFSNRISSSRSMSLLSTLATSVLSVKTFSFSELEKATAQFSSQRVLGEGGFGRVYCGTFDDGTEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVRNGSVESHLHGVDKKMSPLDWEARIKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATDGNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRRPVDMSQPPGQENLVTWARRLLTSREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTNETCGDWNSRKESSAQESDFRGDLAFSDSSWRDAEGVPQLTYGQAPSFITMEHSSGPLEETETRPFSASNLMGNETFISIRHENRSGPLRAARSKLSFHRFTGSQ* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0379 517 PANTHER OS01G0750732 PROTEIN 1 516 - -
Apr8g0379 517 SUPERFAMILY Protein kinase-like (PK-like) 113 407 IPR011009 -
Apr8g0379 517 ProSitePatterns Protein kinases ATP-binding region signature. 139 161 IPR017441 GO:0005524
Apr8g0379 517 Gene3D Transferase(Phosphotransferase) domain 1 209 432 - -
Apr8g0379 517 ProSiteProfiles Protein kinase domain profile. 133 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0379 517 Gene3D Phosphorylase Kinase; domain 1 107 208 - -
Apr8g0379 517 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 1 516 - -
Apr8g0379 517 CDD STKc_IRAK 139 408 - -
Apr8g0379 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Apr8g0379 517 Pfam Protein tyrosine and serine/threonine kinase 135 404 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0379 Apr-Chr8 3193329 3196826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0379 36 446 Receptor kinase-like Gene Family AT5G56890 62.972 4.67e-170 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Apr8g0379 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0379 - - aprc:113873087 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0379 8 3193329 3196826 Apr8g0379 8 3193329 3196826 ECH