Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0373 ATGGCGCTATGGATGGAAAAGGGTTCAGAGCCTTTAACTGAAAGCGAGAAAGCAGACCTTGAAGCCATTGCTGCACTCAAAGAGGCTTCTGCCCTTGAACTTAAGGAAAAGGGTAACCAATATTTGAAGATGGGTAAGAAGCATTACTCAGATGCCATTGATTGCTACACAAGGGCAATCAATCAAAAAGCCTTGAGTGACTCTGACACCTCTATTATCTTTGCCAATAGAGCCCATGTCAATTTGCTGCTTGGAAATCTTAGACGTGCTCTCACTGATGCTCAGGAGGCCCTCAACTTGTGCCCCTCAAATATAAAGGCAATTTATAGAGCTGCCAAAGCTTCCCTTTCACTAAATTTGTTGGCTGAAGCACGAGACTATTGTAAAAGGGGTCTTAAGTTGAACCCCAATAACGAGGAGTTGAAGAAGCTTGATCACCAGATTGATCTGAAGATATCAGAGAATGAAAAGCATAAGGCTGAAGTCTCCAAGACTCTTGCAGAGACTAAGGAACTTGTGTCTGCAATAGAATATAGAGGCTTGAAAATTGGAAAGGCAATGTATCGAGAGCTTACTGGATCAAAGAAACCTATGTTAGACAAAAATAATATCCTTCATTGGCCTGTTCTTCTTTTGTACGCGGAGGTTATGTCCAGTGACTTCATTGAGGATTTCTGTGAGACTGACATGTTTTCGGTTCACCTTGATATGATATTTGCAGAAGACCAGCCGCTGTCATGGGATGTTGAAAACAACTACAGACGAGAATTTATTGAATTGTACTATGAGGCTGGTTCTGGACTTTGTCTATCTAAGGAAAAACTTCTTCATTGTCTATTGGAGGGAACTGCAGCTTCTCATGGGGAAAGTGTTGGTGATGAAGAGAAAGATGCAGTTGAGGAGTTTAAGCAACACACAGGTTCCCCTAAATGGATCAAAGTGAATGAAAGGAGAACACTCCATGATGTTCTCAAAATGCCTAATTTCATCATTCCTGGGATCCCAGTCTTCTATGTTGTTTCGAACCGTTCTAGCTTTTATGCCAAATTCAAAGCTGGAAAGTGGGCTCCTCCAAGTATATGA 1083 0.4164 MALWMEKGSEPLTESEKADLEAIAALKEASALELKEKGNQYLKMGKKHYSDAIDCYTRAINQKALSDSDTSIIFANRAHVNLLLGNLRRALTDAQEALNLCPSNIKAIYRAAKASLSLNLLAEARDYCKRGLKLNPNNEELKKLDHQIDLKISENEKHKAEVSKTLAETKELVSAIEYRGLKIGKAMYRELTGSKKPMLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMFSVHLDMIFAEDQPLSWDVENNYRREFIELYYEAGSGLCLSKEKLLHCLLEGTAASHGESVGDEEKDAVEEFKQHTGSPKWIKVNERRTLHDVLKMPNFIIPGIPVFYVVSNRSSFYAKFKAGKWAPPSI* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0373 360 SUPERFAMILY TPR-like 22 156 IPR011990 GO:0005515
Apr8g0373 360 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 356 - -
Apr8g0373 360 SMART tpr_5 71 104 IPR019734 GO:0005515
Apr8g0373 360 SMART tpr_5 105 138 IPR019734 GO:0005515
Apr8g0373 360 SMART tpr_5 31 66 IPR019734 GO:0005515
Apr8g0373 360 Pfam Cns1/TTC4 Wheel domain 200 267 IPR044059 GO:0051879
Apr8g0373 360 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 356 - -
Apr8g0373 360 Gene3D Tetratricopeptide repeat domain 23 180 IPR011990 GO:0005515
Apr8g0373 360 Coils Coil 141 161 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0373 30 160 Calmodulin-binding Proteins AT3G25230 30.282 1.03e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0373 K24927 - gmx:100783179 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0373 8 3144168 3148588 Apr8g0373 8 3144168 3148588 ECH